Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 HMGB1P13-201ENST00000406019 642 ntBASIC3.1□□□□□ -1.91
CLIP1P30622 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.1□□□□□ -1.91
CLIP1P30622 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.1□□□□□ -1.91
CLIP1P30622 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.1□□□□□ -1.91
CLIP1P30622 AC006483.1-201ENST00000487308 313 ntBASIC3.1□□□□□ -1.91
CLIP1P30622 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.1□□□□□ -1.91
CLIP1P30622 RPS3AP23-202ENST00000574601 686 ntBASIC3.1□□□□□ -1.91
CLIP1P30622 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.1□□□□□ -1.91
CLIP1P30622 MTCO1P6-201ENST00000481192 1384 ntBASIC3.09□□□□□ -1.91
CLIP1P30622 AC114546.3-201ENST00000623582 1734 ntBASIC3.09□□□□□ -1.92
CLIP1P30622 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CLIP1P30622 MIR9-3-201ENST00000385084 90 ntBASIC3.09□□□□□ -1.92
CLIP1P30622 AC019129.1-201ENST00000403786 261 ntBASIC3.09□□□□□ -1.92
CLIP1P30622 RAB9AP5-201ENST00000437794 597 ntBASIC3.09□□□□□ -1.92
CLIP1P30622 RAB9AP2-201ENST00000443911 597 ntBASIC3.09□□□□□ -1.92
CLIP1P30622 RSL24D1P2-201ENST00000445584 366 ntBASIC3.09□□□□□ -1.92
CLIP1P30622 TVP23BP2-201ENST00000455082 615 ntBASIC3.09□□□□□ -1.92
CLIP1P30622 AC098799.2-201ENST00000509466 868 ntBASIC3.09□□□□□ -1.92
CLIP1P30622 RNA5SP182-201ENST00000516064 82 ntBASIC3.09□□□□□ -1.92
CLIP1P30622 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.92
CLIP1P30622 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.09□□□□□ -1.92
CLIP1P30622 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.09□□□□□ -1.92
CLIP1P30622 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.09□□□□□ -1.92
CLIP1P30622 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.09□□□□□ -1.92
CLIP1P30622 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CLIP1P30622 AC007687.1-201ENST00000602704 304 ntBASIC3.09□□□□□ -1.92
CLIP1P30622 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.09□□□□□ -1.92
CLIP1P30622 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.09□□□□□ -1.92
CLIP1P30622 Z82195.2-201ENST00000612348 18351 ntBASIC3.09□□□□□ -1.92
CLIP1P30622 AC245100.2-201ENST00000454544 1679 ntBASIC3.09□□□□□ -1.92
CLIP1P30622 Y_RNA.140-201ENST00000363474 103 ntBASIC3.08□□□□□ -1.92
CLIP1P30622 AC092638.1-201ENST00000411966 1275 ntBASIC3.08□□□□□ -1.92
CLIP1P30622 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.08□□□□□ -1.92
CLIP1P30622 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLIP1P30622 OR4K11P-201ENST00000431829 904 ntBASIC3.08□□□□□ -1.92
CLIP1P30622 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.08□□□□□ -1.92
CLIP1P30622 MTND4LP12-201ENST00000448237 295 ntBASIC3.08□□□□□ -1.92
CLIP1P30622 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.08□□□□□ -1.92
CLIP1P30622 FABP5P13-201ENST00000452144 328 ntBASIC3.08□□□□□ -1.92
CLIP1P30622 AC239798.3-201ENST00000454459 408 ntBASIC3.08□□□□□ -1.92
CLIP1P30622 AC109486.1-201ENST00000486833 374 ntBASIC3.08□□□□□ -1.92
CLIP1P30622 RPS29P11-201ENST00000496507 171 ntBASIC3.08□□□□□ -1.92
CLIP1P30622 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.08□□□□□ -1.92
CLIP1P30622 OR11H5P-201ENST00000554039 926 ntBASIC3.08□□□□□ -1.92
CLIP1P30622 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.08□□□□□ -1.92
CLIP1P30622 AC010329.2-201ENST00000595195 2737 ntBASIC3.08□□□□□ -1.92
CLIP1P30622 SPA17P1-201ENST00000416656 452 ntBASIC3.07□□□□□ -1.92
CLIP1P30622 AC008173.1-201ENST00000418901 264 ntBASIC3.07□□□□□ -1.92
CLIP1P30622 AL592045.1-201ENST00000429867 352 ntBASIC3.07□□□□□ -1.92
CLIP1P30622 AC243772.1-201ENST00000451620 410 ntBASIC3.07□□□□□ -1.92
CLIP1P30622 AC007182.2-201ENST00000489251 402 ntBASIC3.07□□□□□ -1.92
CLIP1P30622 AC091917.2-201ENST00000505002 744 ntBASIC3.07□□□□□ -1.92
CLIP1P30622 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.07□□□□□ -1.92
CLIP1P30622 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLIP1P30622 AC044913.1-201ENST00000557200 430 ntBASIC3.07□□□□□ -1.92
CLIP1P30622 AC034102.8-201ENST00000615146 484 ntBASIC3.07□□□□□ -1.92
CLIP1P30622 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.07□□□□□ -1.92
CLIP1P30622 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CLIP1P30622 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.06□□□□□ -1.92
CLIP1P30622 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.06□□□□□ -1.92
CLIP1P30622 AC106901.1-201ENST00000425086 698 ntBASIC3.06□□□□□ -1.92
CLIP1P30622 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.06□□□□□ -1.92
CLIP1P30622 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.06□□□□□ -1.92
CLIP1P30622 COX6CP5-201ENST00000527162 228 ntBASIC3.06□□□□□ -1.92
CLIP1P30622 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.06□□□□□ -1.92
CLIP1P30622 OR4K7P-201ENST00000580232 945 ntBASIC3.06□□□□□ -1.92
CLIP1P30622 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLIP1P30622 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CLIP1P30622 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLIP1P30622 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.05□□□□□ -1.92
CLIP1P30622 ADAM3A-203ENST00000461344 2157 ntBASIC3.05□□□□□ -1.92
CLIP1P30622 AC103988.1-201ENST00000566382 2177 ntBASIC3.05□□□□□ -1.92
CLIP1P30622 RPL7P46-201ENST00000425129 740 ntBASIC3.05□□□□□ -1.92
CLIP1P30622 AC093392.2-201ENST00000450682 337 ntBASIC3.05□□□□□ -1.92
CLIP1P30622 AC233279.1-201ENST00000455300 423 ntBASIC3.05□□□□□ -1.92
CLIP1P30622 AP001004.1-201ENST00000582468 324 ntBASIC3.05□□□□□ -1.92
CLIP1P30622 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.05□□□□□ -1.92
CLIP1P30622 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.05□□□□□ -1.92
CLIP1P30622 AC091834.1-201ENST00000614543 472 ntBASIC3.05□□□□□ -1.92
CLIP1P30622 AP005901.5-201ENST00000545779 1796 ntBASIC3.05□□□□□ -1.92
CLIP1P30622 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CLIP1P30622 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLIP1P30622 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.04□□□□□ -1.92
CLIP1P30622 U3.15-201ENST00000365398 212 ntBASIC3.04□□□□□ -1.92
CLIP1P30622 RNA5SP213-201ENST00000391031 106 ntBASIC3.04□□□□□ -1.92
CLIP1P30622 RNU2-37P-201ENST00000410695 177 ntBASIC3.04□□□□□ -1.92
CLIP1P30622 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.04□□□□□ -1.92
CLIP1P30622 RPL7P31-201ENST00000450192 724 ntBASIC3.04□□□□□ -1.92
CLIP1P30622 RN7SKP31-201ENST00000516354 278 ntBASIC3.04□□□□□ -1.92
CLIP1P30622 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLIP1P30622 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.04□□□□□ -1.92
CLIP1P30622 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.04□□□□□ -1.92
CLIP1P30622 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.04□□□□□ -1.92
CLIP1P30622 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.04□□□□□ -1.92
CLIP1P30622 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.04□□□□□ -1.92
CLIP1P30622 RPAP2P1-201ENST00000603626 1168 ntBASIC3.04□□□□□ -1.92
CLIP1P30622 AC092954.1-201ENST00000609121 445 ntBASIC3.04□□□□□ -1.92
CLIP1P30622 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC3.04□□□□□ -1.92
CLIP1P30622 AP000553.5-201ENST00000641933 54 ntBASIC3.04□□□□□ -1.92
CLIP1P30622 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms