Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.8□□□□□ -1.8
ABCD3P28288 RPL27AP8-201ENST00000424277 446 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.8□□□□□ -1.8
ABCD3P28288 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.8□□□□□ -1.8
ABCD3P28288 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.8□□□□□ -1.8
ABCD3P28288 SETP8-201ENST00000435341 628 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 AC118469.1-201ENST00000442943 488 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.8□□□□□ -1.8
ABCD3P28288 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.8□□□□□ -1.8
ABCD3P28288 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.8□□□□□ -1.8
ABCD3P28288 AC114755.5-201ENST00000447760 831 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 HMGN2P7-201ENST00000456186 273 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ABCD3P28288 RPS3AP50-201ENST00000487064 803 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 RPS26P15-201ENST00000488067 348 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.8□□□□□ -1.8
ABCD3P28288 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.8□□□□□ -1.8
ABCD3P28288 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.8□□□□□ -1.8
ABCD3P28288 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.8□□□□□ -1.8
ABCD3P28288 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.8□□□□□ -1.8
ABCD3P28288 RNU6-201P-201ENST00000517100 61 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 ERHP1-201ENST00000523006 310 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 OR5M7P-201ENST00000526140 972 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.8□□□□□ -1.8
ABCD3P28288 DEFB108D-201ENST00000527787 222 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 AP000907.2-201ENST00000530827 353 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.8□□□□□ -1.8
ABCD3P28288 AL356057.1-201ENST00000533798 831 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.8□□□□□ -1.8
ABCD3P28288 AC125611.2-201ENST00000551907 647 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.8□□□□□ -1.8
ABCD3P28288 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.8□□□□□ -1.8
ABCD3P28288 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.8□□□□□ -1.8
ABCD3P28288 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.8□□□□□ -1.8
ABCD3P28288 AP001029.3-201ENST00000588063 596 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 AC110760.3-201ENST00000598794 467 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 BDH2P1-201ENST00000602288 736 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 AL359999.1-201ENST00000604513 294 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 AC092653.1-201ENST00000608509 531 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 AP002826.1-201ENST00000608835 315 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
ABCD3P28288 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.8□□□□□ -1.8
ABCD3P28288 CU459211.1-201ENST00000635667 749 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
ABCD3P28288 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ABCD3P28288 ELL2P3-201ENST00000457883 1602 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 AC092326.2-201ENST00000624772 1561 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ABCD3P28288 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
ABCD3P28288 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.79□□□□□ -1.8
ABCD3P28288 AL138713.1-201ENST00000624026 2130 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ABCD3P28288 SDAD1P2-201ENST00000441308 2028 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 Y_RNA.46-201ENST00000362695 102 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 RNU4-21P-201ENST00000362802 126 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ABCD3P28288 RNU6-533P-201ENST00000384144 107 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 SNORD115.1-201ENST00000391109 76 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 PPP1R11P2-201ENST00000423543 382 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ABCD3P28288 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.79□□□□□ -1.8
ABCD3P28288 RPL22P17-201ENST00000438729 315 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.79□□□□□ -1.8
ABCD3P28288 AL662791.1-201ENST00000441992 928 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 COX6CP2-201ENST00000444980 225 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 MTND2P4-201ENST00000445034 1004 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 TPT1P14-201ENST00000448018 505 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 AC009961.3-201ENST00000449832 765 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 RPS11P1-201ENST00000451072 473 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 RPL38P1-201ENST00000460914 211 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 RPS7P7-201ENST00000463499 571 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.79□□□□□ -1.8
ABCD3P28288 AC006517.1-201ENST00000480485 328 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.79□□□□□ -1.8
ABCD3P28288 RPL29P14-201ENST00000495837 428 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 AC114967.1-201ENST00000504890 259 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.79□□□□□ -1.8
ABCD3P28288 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.79□□□□□ -1.8
ABCD3P28288 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ABCD3P28288 NPM1P41-201ENST00000512920 831 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.79□□□□□ -1.8
ABCD3P28288 OR4T1P-201ENST00000554933 911 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 ACTR3BP3-201ENST00000565577 979 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.79□□□□□ -1.8
ABCD3P28288 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.79□□□□□ -1.8
ABCD3P28288 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.79□□□□□ -1.8
ABCD3P28288 MIR3921-201ENST00000577308 85 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 COX6CP3-201ENST00000580869 223 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 MIR5684-201ENST00000585074 65 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.79□□□□□ -1.8
ABCD3P28288 AC093838.1-201ENST00000613014 469 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 AC019226.1-201ENST00000625666 515 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ABCD3P28288 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.79□□□□□ -1.8
ABCD3P28288 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
ABCD3P28288 AC002546.1-201ENST00000588041 2504 ntBASIC3.79□□□□□ -1.8
ABCD3P28288 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.79□□□□□ -1.8
ABCD3P28288 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.79□□□□□ -1.8
ABCD3P28288 PRO1804-201ENST00000623780 2050 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms