Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.47□□□□□ -1.69
POLR2AP24928 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.47□□□□□ -1.69
POLR2AP24928 PRELID3BP8-201ENST00000604148 295 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.47□□□□□ -1.69
POLR2AP24928 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
POLR2AP24928 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
POLR2AP24928 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
POLR2AP24928 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
POLR2AP24928 AC093591.2-201ENST00000565254 3843 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
POLR2AP24928 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.69
POLR2AP24928 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
POLR2AP24928 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
POLR2AP24928 RNU4-35P-201ENST00000362588 141 ntBASIC4.46□□□□□ -1.7
POLR2AP24928 Y_RNA.500-201ENST00000384466 111 ntBASIC4.46□□□□□ -1.7
POLR2AP24928 SDCBPP3-201ENST00000419629 891 ntBASIC4.46□□□□□ -1.7
POLR2AP24928 AC073464.1-201ENST00000429823 534 ntBASIC4.46□□□□□ -1.7
POLR2AP24928 FCF1P1-201ENST00000432690 571 ntBASIC4.46□□□□□ -1.7
POLR2AP24928 RPL21P110-201ENST00000433345 446 ntBASIC4.46□□□□□ -1.7
POLR2AP24928 AC073063.1-201ENST00000434352 607 ntBASIC4.46□□□□□ -1.7
POLR2AP24928 RPL12P18-201ENST00000437175 325 ntBASIC4.46□□□□□ -1.7
POLR2AP24928 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
POLR2AP24928 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.46□□□□□ -1.7
POLR2AP24928 AC021205.1-201ENST00000468797 348 ntBASIC4.46□□□□□ -1.7
POLR2AP24928 HMGB1P29-201ENST00000505659 499 ntBASIC4.46□□□□□ -1.7
POLR2AP24928 AP000790.1-201ENST00000528891 737 ntBASIC4.46□□□□□ -1.7
POLR2AP24928 OR4A45P-201ENST00000529954 901 ntBASIC4.46□□□□□ -1.7
POLR2AP24928 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.46□□□□□ -1.7
POLR2AP24928 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.46□□□□□ -1.7
POLR2AP24928 AC069240.1-201ENST00000548774 375 ntBASIC4.46□□□□□ -1.7
POLR2AP24928 AL033523.1-201ENST00000605153 153 ntBASIC4.46□□□□□ -1.7
POLR2AP24928 AC119674.1-212ENST00000641155 993 ntBASIC4.46□□□□□ -1.7
POLR2AP24928 CASC19-280ENST00000642102 1351 ntBASIC4.46□□□□□ -1.7
POLR2AP24928 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
POLR2AP24928 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
POLR2AP24928 AC116158.1-201ENST00000560231 2129 ntBASIC4.46□□□□□ -1.7
POLR2AP24928 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.46□□□□□ -1.7
POLR2AP24928 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
POLR2AP24928 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
POLR2AP24928 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
POLR2AP24928 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
POLR2AP24928 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.46□□□□□ -1.7
POLR2AP24928 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
POLR2AP24928 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.46□□□□□ -1.7
POLR2AP24928 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
POLR2AP24928 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
POLR2AP24928 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.45□□□□□ -1.7
POLR2AP24928 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
POLR2AP24928 MIR506-201ENST00000384998 124 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 MIR1271-201ENST00000408537 86 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 MIR1251-201ENST00000408552 70 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.45□□□□□ -1.7
POLR2AP24928 MTCO3P1-205ENST00000422088 832 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.45□□□□□ -1.7
POLR2AP24928 AL118496.2-201ENST00000448300 230 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 SNRPGP6-201ENST00000451124 220 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.45□□□□□ -1.7
POLR2AP24928 AC108022.1-201ENST00000493466 478 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 AC022447.3-201ENST00000506865 495 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.45□□□□□ -1.7
POLR2AP24928 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.45□□□□□ -1.7
POLR2AP24928 RNU6-1153P-201ENST00000516760 105 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.45□□□□□ -1.7
POLR2AP24928 OR8L1P-201ENST00000534005 955 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.45□□□□□ -1.7
POLR2AP24928 AC008127.2-201ENST00000549925 1075 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 RPL21P5-201ENST00000554662 472 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.45□□□□□ -1.7
POLR2AP24928 UBE2V2P2-201ENST00000587677 504 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.45□□□□□ -1.7
POLR2AP24928 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
POLR2AP24928 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.45□□□□□ -1.7
POLR2AP24928 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
POLR2AP24928 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
POLR2AP24928 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
POLR2AP24928 RNA5SP50-201ENST00000363731 107 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 RNU1-33P-201ENST00000364249 162 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.45□□□□□ -1.7
POLR2AP24928 AL034374.1-201ENST00000406329 351 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 RPS25P9-201ENST00000435591 252 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.45□□□□□ -1.7
POLR2AP24928 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.45□□□□□ -1.7
POLR2AP24928 RN7SL601P-201ENST00000471221 293 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.45□□□□□ -1.7
POLR2AP24928 RNU6-445P-201ENST00000516949 107 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 AC008802.1-201ENST00000519121 791 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 AC006077.1-201ENST00000604746 343 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 AL009028.1-201ENST00000604895 802 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.45□□□□□ -1.7
POLR2AP24928 AL590282.1-201ENST00000610379 1136 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.45□□□□□ -1.7
POLR2AP24928 AL732618.1-201ENST00000623251 301 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 AP003122.6-201ENST00000623831 495 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 PISRT1-201ENST00000626175 531 ntBASIC4.45□□□□□ -1.7
POLR2AP24928 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.45□□□□□ -1.7
POLR2AP24928 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
POLR2AP24928 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.45□□□□□ -1.7
POLR2AP24928 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.45□□□□□ -1.7
POLR2AP24928 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms