Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DOBP13765 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DOBP13765 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DOBP13765 Y_RNA.41-201ENST00000362646 102 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 Y_RNA.234-201ENST00000364409 97 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 RNU6-259P-201ENST00000383999 107 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 RNU6-517P-201ENST00000384362 110 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 RNU1-13P-201ENST00000384499 162 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 Y_RNA.516-201ENST00000384541 124 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 MT-TC-201ENST00000387405 66 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 U3.29-201ENST00000391296 212 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 UBE2V1P10-201ENST00000414685 269 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DOBP13765 HMGB3P23-201ENST00000414981 585 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DOBP13765 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.51□□□□□ -1.85
HLA-DOBP13765 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DOBP13765 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.51□□□□□ -1.85
HLA-DOBP13765 MTCYBP45-201ENST00000435243 565 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.51□□□□□ -1.85
HLA-DOBP13765 AC073614.1-201ENST00000438690 650 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 MTND6P13-201ENST00000443510 523 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DOBP13765 AC114755.5-201ENST00000447760 831 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 TPT1P12-201ENST00000448968 492 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.51□□□□□ -1.85
HLA-DOBP13765 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DOBP13765 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 AC099563.1-201ENST00000456086 418 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 RPL9P33-201ENST00000484311 566 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 AC010460.1-201ENST00000507087 466 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 NDUFB4P2-201ENST00000509515 391 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 IGKV2D-36-201ENST00000518643 226 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.51□□□□□ -1.85
HLA-DOBP13765 AC087369.1-201ENST00000520775 996 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.51□□□□□ -1.85
HLA-DOBP13765 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DOBP13765 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.51□□□□□ -1.85
HLA-DOBP13765 OR8L1P-201ENST00000534005 955 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DOBP13765 RPL21P5-201ENST00000554662 472 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.51□□□□□ -1.85
HLA-DOBP13765 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DOBP13765 AC027807.1-201ENST00000559921 996 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 AC137800.2-201ENST00000574375 120 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DOBP13765 MIR3682-201ENST00000581338 84 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.51□□□□□ -1.85
HLA-DOBP13765 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.51□□□□□ -1.85
HLA-DOBP13765 AC090578.1-201ENST00000604955 591 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 AC091834.1-201ENST00000614543 472 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 AC095031.1-201ENST00000623685 672 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DOBP13765 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DOBP13765 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DOBP13765 AC099654.13-201ENST00000639774 207 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 AC099654.12-201ENST00000639868 649 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DOBP13765 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DOBP13765 AC074029.4-201ENST00000624796 1859 ntBASIC3.51□□□□□ -1.85
HLA-DOBP13765 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DOBP13765 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.51□□□□□ -1.85
HLA-DOBP13765 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
HLA-DOBP13765 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DOBP13765 FAM91A3P-201ENST00000456826 2544 ntBASIC3.5□□□□□ -1.85
HLA-DOBP13765 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DOBP13765 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DOBP13765 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DOBP13765 UBE3AP2-201ENST00000429033 2259 ntBASIC3.5□□□□□ -1.85
HLA-DOBP13765 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DOBP13765 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DOBP13765 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DOBP13765 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DOBP13765 FRG1BP-201ENST00000278882 761 ntBASIC3.5□□□□□ -1.85
HLA-DOBP13765 SPRR2C-201ENST00000290702 219 ntBASIC3.5□□□□□ -1.85
HLA-DOBP13765 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.5□□□□□ -1.85
HLA-DOBP13765 RNU6-359P-201ENST00000365466 108 ntBASIC3.5□□□□□ -1.85
HLA-DOBP13765 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DOBP13765 RPS20P2-201ENST00000402520 389 ntBASIC3.5□□□□□ -1.85
HLA-DOBP13765 RPL7P25-201ENST00000404151 721 ntBASIC3.5□□□□□ -1.85
HLA-DOBP13765 FCF1P9-201ENST00000412546 282 ntBASIC3.5□□□□□ -1.85
HLA-DOBP13765 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DOBP13765 AC104651.1-201ENST00000427559 735 ntBASIC3.5□□□□□ -1.85
HLA-DOBP13765 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DOBP13765 RABEPKP1-201ENST00000440529 1026 ntBASIC3.5□□□□□ -1.85
HLA-DOBP13765 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DOBP13765 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DOBP13765 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DOBP13765 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.5□□□□□ -1.85
HLA-DOBP13765 RPL29P29-201ENST00000448725 423 ntBASIC3.5□□□□□ -1.85
HLA-DOBP13765 AL162151.2-201ENST00000448875 158 ntBASIC3.5□□□□□ -1.85
HLA-DOBP13765 RPS17P13-201ENST00000448974 407 ntBASIC3.5□□□□□ -1.85
HLA-DOBP13765 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DOBP13765 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DOBP13765 RPS20P32-201ENST00000456044 356 ntBASIC3.5□□□□□ -1.85
HLA-DOBP13765 AP1S2P1-201ENST00000457344 379 ntBASIC3.5□□□□□ -1.85
HLA-DOBP13765 TMED11P-201ENST00000479478 690 ntBASIC3.5□□□□□ -1.85
HLA-DOBP13765 AC110792.1-201ENST00000491826 472 ntBASIC3.5□□□□□ -1.85
HLA-DOBP13765 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms