Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.77□□□□□ -1.65
COL6A2P12110 RPS17P8-201ENST00000434525 335 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 IFNA20P-201ENST00000436840 528 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 Z80107.2-201ENST00000445127 392 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 TDGF1P1-201ENST00000445734 527 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 RN7SL172P-201ENST00000460535 303 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 AC006512.1-201ENST00000468816 291 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 COPS8P2-201ENST00000473228 627 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL6A2P12110 AC008953.1-201ENST00000497334 318 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 AC068305.1-201ENST00000497406 726 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 SCARNA15.1-201ENST00000516384 125 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 AC022790.1-201ENST00000522872 204 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.77□□□□□ -1.65
COL6A2P12110 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.77□□□□□ -1.65
COL6A2P12110 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.77□□□□□ -1.65
COL6A2P12110 DYNLL1P4-201ENST00000549314 266 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 PSMA3P-201ENST00000555485 635 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 AL049839.1-201ENST00000556151 657 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.77□□□□□ -1.65
COL6A2P12110 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.77□□□□□ -1.65
COL6A2P12110 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.77□□□□□ -1.65
COL6A2P12110 uc_338.5-201ENST00000611839 155 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL6A2P12110 AC126177.8-201ENST00000618339 1015 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 AC090617.10-201ENST00000624308 134 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.77□□□□□ -1.65
COL6A2P12110 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.77□□□□□ -1.65
COL6A2P12110 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.77□□□□□ -1.65
COL6A2P12110 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.77□□□□□ -1.65
COL6A2P12110 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.77□□□□□ -1.65
COL6A2P12110 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.77□□□□□ -1.65
COL6A2P12110 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL6A2P12110 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.77□□□□□ -1.65
COL6A2P12110 MTND4P35-201ENST00000604257 1375 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 SCN1A-220ENST00000641603 12506 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 ZFRP1-201ENST00000457579 2970 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL6A2P12110 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
COL6A2P12110 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL6A2P12110 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL6A2P12110 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL6A2P12110 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
COL6A2P12110 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL6A2P12110 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.76□□□□□ -1.65
COL6A2P12110 AL139276.1-201ENST00000311910 1001 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 SNORA58B-201ENST00000364259 136 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL6A2P12110 RNU6-1227P-201ENST00000383981 107 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 RNU6-339P-201ENST00000384310 107 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 SNORA70-201ENST00000384436 135 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 RPL32P23-201ENST00000397237 405 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 MIR921-201ENST00000401133 56 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.76□□□□□ -1.65
COL6A2P12110 DPPA2P3-201ENST00000411853 655 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 MTND3P8-201ENST00000412909 339 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.76□□□□□ -1.65
COL6A2P12110 RPL23AP38-201ENST00000423801 469 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 AC008065.1-201ENST00000428525 348 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 SAR1AP4-201ENST00000429225 591 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 MTATP6P16-201ENST00000434543 526 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 AL138799.3-201ENST00000438968 350 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.76□□□□□ -1.65
COL6A2P12110 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.76□□□□□ -1.65
COL6A2P12110 AC016696.1-201ENST00000446949 318 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 AC006480.1-201ENST00000449887 378 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 HMGN2P26-201ENST00000463169 339 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.76□□□□□ -1.65
COL6A2P12110 AC072052.1-201ENST00000496556 306 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL6A2P12110 AC006499.3-201ENST00000506077 748 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 AC021146.3-201ENST00000511911 260 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 AC112206.3-201ENST00000514578 389 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 RN7SKP219-201ENST00000516825 296 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 RNA5SP392-201ENST00000516905 112 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 AC107953.1-201ENST00000522216 297 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 AC093027.1-201ENST00000546698 429 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.76□□□□□ -1.65
COL6A2P12110 FKBP1BP1-201ENST00000553366 325 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.76□□□□□ -1.65
COL6A2P12110 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.76□□□□□ -1.65
COL6A2P12110 MIR4775-201ENST00000581168 75 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.76□□□□□ -1.65
COL6A2P12110 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.76□□□□□ -1.65
COL6A2P12110 AL121992.2-201ENST00000606262 256 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 AP001521.2-201ENST00000608772 546 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 AL022401.1-201ENST00000619498 108 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 AC140113.4-201ENST00000622087 222 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 TPTEP1-208ENST00000636884 213 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.76□□□□□ -1.65
COL6A2P12110 PABPC1P6-201ENST00000445594 1829 ntBASIC4.76□□□□□ -1.65
COL6A2P12110 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.76□□□□□ -1.65
COL6A2P12110 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.76□□□□□ -1.65
COL6A2P12110 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
COL6A2P12110 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL6A2P12110 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL6A2P12110 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL6A2P12110 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms