Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL353997.4-201ENST00000586196 166 ntBASIC3.86□□□□□ -1.79
PCNAP12004 AC083760.1-201ENST00000589621 670 ntBASIC3.86□□□□□ -1.79
PCNAP12004 AC146944.4-201ENST00000602697 718 ntBASIC3.86□□□□□ -1.79
PCNAP12004 AC004853.1-201ENST00000604902 698 ntBASIC3.86□□□□□ -1.79
PCNAP12004 MIR6868-201ENST00000611215 58 ntBASIC3.86□□□□□ -1.79
PCNAP12004 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCNAP12004 U73479.1-201ENST00000618062 168 ntBASIC3.86□□□□□ -1.79
PCNAP12004 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCNAP12004 AL596245.1-201ENST00000618994 362 ntBASIC3.86□□□□□ -1.79
PCNAP12004 MIR6830-201ENST00000636015 70 ntBASIC3.86□□□□□ -1.79
PCNAP12004 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PCNAP12004 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
PCNAP12004 MTND4P4-201ENST00000439033 1366 ntBASIC3.86□□□□□ -1.79
PCNAP12004 AC138915.3-201ENST00000562908 1389 ntBASIC3.86□□□□□ -1.79
PCNAP12004 MTND5P3-201ENST00000438536 1800 ntBASIC3.86□□□□□ -1.79
PCNAP12004 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.85□□□□□ -1.79
PCNAP12004 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCNAP12004 AL049780.3-201ENST00000624612 1583 ntBASIC3.85□□□□□ -1.79
PCNAP12004 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCNAP12004 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PCNAP12004 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PCNAP12004 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PCNAP12004 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.85□□□□□ -1.79
PCNAP12004 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCNAP12004 RNA5SP130-201ENST00000364431 114 ntBASIC3.85□□□□□ -1.79
PCNAP12004 RNU6-1207P-201ENST00000384343 107 ntBASIC3.85□□□□□ -1.79
PCNAP12004 RNU6-821P-201ENST00000390995 107 ntBASIC3.85□□□□□ -1.79
PCNAP12004 AL356421.1-201ENST00000403255 413 ntBASIC3.85□□□□□ -1.79
PCNAP12004 MTHFD2P2-201ENST00000407725 247 ntBASIC3.85□□□□□ -1.79
PCNAP12004 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCNAP12004 RPL7AP73-201ENST00000413490 353 ntBASIC3.85□□□□□ -1.79
PCNAP12004 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.85□□□□□ -1.79
PCNAP12004 AC007390.1-201ENST00000415722 356 ntBASIC3.85□□□□□ -1.79
PCNAP12004 COX6CP17-201ENST00000421389 185 ntBASIC3.85□□□□□ -1.79
PCNAP12004 ARF4P2-201ENST00000430209 526 ntBASIC3.85□□□□□ -1.79
PCNAP12004 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.85□□□□□ -1.79
PCNAP12004 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.85□□□□□ -1.79
PCNAP12004 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.85□□□□□ -1.79
PCNAP12004 AC009220.1-201ENST00000451614 275 ntBASIC3.85□□□□□ -1.79
PCNAP12004 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.85□□□□□ -1.79
PCNAP12004 RN7SL271P-201ENST00000487601 295 ntBASIC3.85□□□□□ -1.79
PCNAP12004 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PCNAP12004 COX7A2P2-201ENST00000505291 250 ntBASIC3.85□□□□□ -1.79
PCNAP12004 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.85□□□□□ -1.79
PCNAP12004 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.85□□□□□ -1.79
PCNAP12004 AC006390.1-201ENST00000508068 283 ntBASIC3.85□□□□□ -1.79
PCNAP12004 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.85□□□□□ -1.79
PCNAP12004 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.85□□□□□ -1.79
PCNAP12004 AC010342.1-201ENST00000514047 877 ntBASIC3.85□□□□□ -1.79
PCNAP12004 RNA5SP143-201ENST00000516936 115 ntBASIC3.85□□□□□ -1.79
PCNAP12004 RNU6-714P-201ENST00000516963 103 ntBASIC3.85□□□□□ -1.79
PCNAP12004 OR5D17P-201ENST00000531492 978 ntBASIC3.85□□□□□ -1.79
PCNAP12004 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.85□□□□□ -1.79
PCNAP12004 MIR3186-201ENST00000577404 85 ntBASIC3.85□□□□□ -1.79
PCNAP12004 MIR3611-201ENST00000584484 83 ntBASIC3.85□□□□□ -1.79
PCNAP12004 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.85□□□□□ -1.79
PCNAP12004 AC112187.2-201ENST00000604345 283 ntBASIC3.85□□□□□ -1.79
PCNAP12004 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PCNAP12004 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.85□□□□□ -1.79
PCNAP12004 AC091965.4-201ENST00000607691 587 ntBASIC3.85□□□□□ -1.79
PCNAP12004 AC010678.1-201ENST00000614118 713 ntBASIC3.85□□□□□ -1.79
PCNAP12004 AC104010.1-201ENST00000616889 150 ntBASIC3.85□□□□□ -1.79
PCNAP12004 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.85□□□□□ -1.79
PCNAP12004 XIST_intron.1-201ENST00000619444 68 ntBASIC3.85□□□□□ -1.79
PCNAP12004 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.85□□□□□ -1.79
PCNAP12004 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.85□□□□□ -1.79
PCNAP12004 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PCNAP12004 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCNAP12004 BDP1P-201ENST00000582658 1990 ntBASIC3.85□□□□□ -1.79
PCNAP12004 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.85□□□□□ -1.79
PCNAP12004 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.85□□□□□ -1.79
PCNAP12004 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCNAP12004 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.84□□□□□ -1.79
PCNAP12004 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCNAP12004 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCNAP12004 AC006504.1-201ENST00000562493 3666 ntBASIC3.84□□□□□ -1.79
PCNAP12004 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.84□□□□□ -1.79
PCNAP12004 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCNAP12004 AL161781.1-201ENST00000354277 403 ntBASIC3.84□□□□□ -1.79
PCNAP12004 RNU5E-5P-201ENST00000365379 116 ntBASIC3.84□□□□□ -1.79
PCNAP12004 Y_RNA.359-201ENST00000365498 102 ntBASIC3.84□□□□□ -1.79
PCNAP12004 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCNAP12004 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
PCNAP12004 SNORD51-201ENST00000384320 80 ntBASIC3.84□□□□□ -1.79
PCNAP12004 RPS26P8-201ENST00000393490 348 ntBASIC3.84□□□□□ -1.79
PCNAP12004 RNU2-47P-201ENST00000410649 186 ntBASIC3.84□□□□□ -1.79
PCNAP12004 RNU4-6P-201ENST00000410804 122 ntBASIC3.84□□□□□ -1.79
PCNAP12004 RPL17P12-201ENST00000413391 526 ntBASIC3.84□□□□□ -1.79
PCNAP12004 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.84□□□□□ -1.79
PCNAP12004 AL356583.2-201ENST00000426536 280 ntBASIC3.84□□□□□ -1.79
PCNAP12004 C4BPAP2-201ENST00000428434 478 ntBASIC3.84□□□□□ -1.79
PCNAP12004 AC096638.2-201ENST00000434965 711 ntBASIC3.84□□□□□ -1.79
PCNAP12004 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.84□□□□□ -1.79
PCNAP12004 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.84□□□□□ -1.79
PCNAP12004 Z95327.1-201ENST00000446082 482 ntBASIC3.84□□□□□ -1.79
PCNAP12004 ST13P20-201ENST00000447996 1065 ntBASIC3.84□□□□□ -1.79
PCNAP12004 RPS11P1-201ENST00000451072 473 ntBASIC3.84□□□□□ -1.79
PCNAP12004 snoU13.3-201ENST00000459441 104 ntBASIC3.84□□□□□ -1.79
PCNAP12004 OR9M1P-201ENST00000459641 921 ntBASIC3.84□□□□□ -1.79
PCNAP12004 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms