Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TOP1P11387 AL049873.1-201ENST00000480540 376 ntBASIC3.39□□□□□ -1.87
TOP1P11387 AC096576.1-201ENST00000489014 359 ntBASIC3.39□□□□□ -1.87
TOP1P11387 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.39□□□□□ -1.87
TOP1P11387 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.39□□□□□ -1.87
TOP1P11387 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TOP1P11387 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.39□□□□□ -1.87
TOP1P11387 IGJP1-201ENST00000522682 475 ntBASIC3.39□□□□□ -1.87
TOP1P11387 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.39□□□□□ -1.87
TOP1P11387 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.39□□□□□ -1.87
TOP1P11387 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.39□□□□□ -1.87
TOP1P11387 AC004832.5-201ENST00000608677 401 ntBASIC3.39□□□□□ -1.87
TOP1P11387 AC022509.4-201ENST00000621404 572 ntBASIC3.39□□□□□ -1.87
TOP1P11387 AC098679.5-201ENST00000624394 571 ntBASIC3.39□□□□□ -1.87
TOP1P11387 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.39□□□□□ -1.87
TOP1P11387 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.39□□□□□ -1.87
TOP1P11387 AC106858.1-201ENST00000637497 429 ntBASIC3.39□□□□□ -1.87
TOP1P11387 FAM35CP-201ENST00000554755 2470 ntBASIC3.39□□□□□ -1.87
TOP1P11387 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
TOP1P11387 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
TOP1P11387 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
TOP1P11387 AC092435.3-201ENST00000565538 3654 ntBASIC3.39□□□□□ -1.87
TOP1P11387 AC130650.2-201ENST00000618736 2403 ntBASIC3.39□□□□□ -1.87
TOP1P11387 AC090740.1-201ENST00000623193 2262 ntBASIC3.39□□□□□ -1.87
TOP1P11387 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TOP1P11387 RNU6-7-201ENST00000364784 107 ntBASIC3.38□□□□□ -1.87
TOP1P11387 RNU6-8-201ENST00000365467 107 ntBASIC3.38□□□□□ -1.87
TOP1P11387 RNU6-650P-201ENST00000365658 111 ntBASIC3.38□□□□□ -1.87
TOP1P11387 AC009237.2-201ENST00000421358 284 ntBASIC3.38□□□□□ -1.87
TOP1P11387 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.38□□□□□ -1.87
TOP1P11387 RPS6P14-201ENST00000425165 719 ntBASIC3.38□□□□□ -1.87
TOP1P11387 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.38□□□□□ -1.87
TOP1P11387 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.38□□□□□ -1.87
TOP1P11387 AC025750.2-201ENST00000442609 450 ntBASIC3.38□□□□□ -1.87
TOP1P11387 AL929288.2-201ENST00000446368 407 ntBASIC3.38□□□□□ -1.87
TOP1P11387 AC104472.2-201ENST00000469035 601 ntBASIC3.38□□□□□ -1.87
TOP1P11387 AC092902.1-201ENST00000486999 259 ntBASIC3.38□□□□□ -1.87
TOP1P11387 AC104629.1-201ENST00000494226 508 ntBASIC3.38□□□□□ -1.87
TOP1P11387 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.38□□□□□ -1.87
TOP1P11387 AC111000.2-201ENST00000507775 550 ntBASIC3.38□□□□□ -1.87
TOP1P11387 HIGD1AP13-201ENST00000509878 289 ntBASIC3.38□□□□□ -1.87
TOP1P11387 SCARNA13-201ENST00000516672 275 ntBASIC3.38□□□□□ -1.87
TOP1P11387 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.38□□□□□ -1.87
TOP1P11387 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.38□□□□□ -1.87
TOP1P11387 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TOP1P11387 AC106734.1-201ENST00000568646 663 ntBASIC3.38□□□□□ -1.87
TOP1P11387 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.38□□□□□ -1.87
TOP1P11387 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.38□□□□□ -1.87
TOP1P11387 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.38□□□□□ -1.87
TOP1P11387 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.38□□□□□ -1.87
TOP1P11387 AC006116.7-201ENST00000590141 756 ntBASIC3.38□□□□□ -1.87
TOP1P11387 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.38□□□□□ -1.87
TOP1P11387 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TOP1P11387 AP003122.6-201ENST00000623831 495 ntBASIC3.38□□□□□ -1.87
TOP1P11387 AL136520.1-201ENST00000600311 1322 ntBASIC3.38□□□□□ -1.87
TOP1P11387 MFSD8-213ENST00000641134 1327 ntBASIC3.38□□□□□ -1.87
TOP1P11387 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TOP1P11387 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.37□□□□□ -1.87
TOP1P11387 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TOP1P11387 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TOP1P11387 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
TOP1P11387 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
TOP1P11387 RNU6-712P-201ENST00000410558 100 ntBASIC3.37□□□□□ -1.87
TOP1P11387 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.37□□□□□ -1.87
TOP1P11387 AL121882.1-201ENST00000422893 417 ntBASIC3.37□□□□□ -1.87
TOP1P11387 UBE2D3P3-201ENST00000426992 425 ntBASIC3.37□□□□□ -1.87
TOP1P11387 AL512661.1-201ENST00000434586 1253 ntBASIC3.37□□□□□ -1.87
TOP1P11387 RPS20P5-201ENST00000434808 360 ntBASIC3.37□□□□□ -1.87
TOP1P11387 RPL21P41-201ENST00000459863 264 ntBASIC3.37□□□□□ -1.87
TOP1P11387 RPL21P18-201ENST00000469899 480 ntBASIC3.37□□□□□ -1.87
TOP1P11387 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TOP1P11387 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.37□□□□□ -1.87
TOP1P11387 SNRPGP16-201ENST00000533275 226 ntBASIC3.37□□□□□ -1.87
TOP1P11387 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.37□□□□□ -1.87
TOP1P11387 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.37□□□□□ -1.87
TOP1P11387 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.37□□□□□ -1.87
TOP1P11387 AC034105.3-201ENST00000565294 442 ntBASIC3.37□□□□□ -1.87
TOP1P11387 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.37□□□□□ -1.87
TOP1P11387 AC024153.1-201ENST00000603103 365 ntBASIC3.37□□□□□ -1.87
TOP1P11387 AC006329.2-201ENST00000611491 394 ntBASIC3.37□□□□□ -1.87
TOP1P11387 RMST_10.1-201ENST00000616309 154 ntBASIC3.37□□□□□ -1.87
TOP1P11387 AC091046.2-201ENST00000620775 665 ntBASIC3.37□□□□□ -1.87
TOP1P11387 AL391262.2-201ENST00000622466 494 ntBASIC3.37□□□□□ -1.87
TOP1P11387 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.37□□□□□ -1.87
TOP1P11387 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
TOP1P11387 AL355596.1-201ENST00000565399 3996 ntBASIC3.36□□□□□ -1.87
TOP1P11387 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.36□□□□□ -1.87
TOP1P11387 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.36□□□□□ -1.87
TOP1P11387 SNORA18.3-201ENST00000384122 132 ntBASIC3.36□□□□□ -1.87
TOP1P11387 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.36□□□□□ -1.87
TOP1P11387 AL645937.1-202ENST00000421799 937 ntBASIC3.36□□□□□ -1.87
TOP1P11387 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.36□□□□□ -1.87
TOP1P11387 AC013410.2-201ENST00000422627 201 ntBASIC3.36□□□□□ -1.87
TOP1P11387 MTCO2P1-201ENST00000424648 477 ntBASIC3.36□□□□□ -1.87
TOP1P11387 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.36□□□□□ -1.87
TOP1P11387 AC093156.1-201ENST00000440382 670 ntBASIC3.36□□□□□ -1.87
TOP1P11387 RNFT1P2-201ENST00000443064 757 ntBASIC3.36□□□□□ -1.87
TOP1P11387 GAPDHP27-201ENST00000447427 1020 ntBASIC3.36□□□□□ -1.87
TOP1P11387 AC093392.2-201ENST00000450682 337 ntBASIC3.36□□□□□ -1.87
TOP1P11387 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms