Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 IPMKP1-201ENST00000425988 855 ntBASIC4.83□□□□□ -1.64
SNRPA1P09661 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.83□□□□□ -1.64
SNRPA1P09661 CYCSP43-201ENST00000438233 310 ntBASIC4.83□□□□□ -1.64
SNRPA1P09661 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.83□□□□□ -1.64
SNRPA1P09661 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.83□□□□□ -1.64
SNRPA1P09661 AC003071.1-201ENST00000451219 789 ntBASIC4.83□□□□□ -1.64
SNRPA1P09661 PRSS3P4-201ENST00000453323 162 ntBASIC4.83□□□□□ -1.64
SNRPA1P09661 RNU7-136P-201ENST00000458819 69 ntBASIC4.83□□□□□ -1.64
SNRPA1P09661 RPS15AP17-201ENST00000470598 390 ntBASIC4.83□□□□□ -1.64
SNRPA1P09661 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SNRPA1P09661 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SNRPA1P09661 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.83□□□□□ -1.64
SNRPA1P09661 POU5F1P7-201ENST00000508759 541 ntBASIC4.83□□□□□ -1.64
SNRPA1P09661 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.83□□□□□ -1.64
SNRPA1P09661 AC022483.1-201ENST00000514020 567 ntBASIC4.83□□□□□ -1.64
SNRPA1P09661 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.83□□□□□ -1.64
SNRPA1P09661 SNORD116-26-201ENST00000516006 96 ntBASIC4.83□□□□□ -1.64
SNRPA1P09661 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SNRPA1P09661 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.83□□□□□ -1.64
SNRPA1P09661 AC068587.4-201ENST00000533893 186 ntBASIC4.83□□□□□ -1.64
SNRPA1P09661 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.83□□□□□ -1.64
SNRPA1P09661 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.83□□□□□ -1.64
SNRPA1P09661 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.83□□□□□ -1.64
SNRPA1P09661 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.83□□□□□ -1.64
SNRPA1P09661 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.83□□□□□ -1.64
SNRPA1P09661 ZNF519P2-201ENST00000557032 169 ntBASIC4.83□□□□□ -1.64
SNRPA1P09661 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.83□□□□□ -1.64
SNRPA1P09661 MIR4307-201ENST00000582802 84 ntBASIC4.83□□□□□ -1.64
SNRPA1P09661 MIR3922-201ENST00000585192 84 ntBASIC4.83□□□□□ -1.64
SNRPA1P09661 AC012603.1-201ENST00000606424 528 ntBASIC4.83□□□□□ -1.64
SNRPA1P09661 AL357078.3-201ENST00000607528 618 ntBASIC4.83□□□□□ -1.64
SNRPA1P09661 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SNRPA1P09661 AC123768.4-201ENST00000616244 701 ntBASIC4.83□□□□□ -1.64
SNRPA1P09661 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.83□□□□□ -1.64
SNRPA1P09661 CR381653.2-201ENST00000624041 768 ntBASIC4.83□□□□□ -1.64
SNRPA1P09661 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.83□□□□□ -1.64
SNRPA1P09661 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SNRPA1P09661 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNRPA1P09661 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SNRPA1P09661 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SNRPA1P09661 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNRPA1P09661 AP002907.1-201ENST00000606361 1430 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.82□□□□□ -1.64
SNRPA1P09661 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
SNRPA1P09661 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNRPA1P09661 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.82□□□□□ -1.64
SNRPA1P09661 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SNRPA1P09661 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.82□□□□□ -1.64
SNRPA1P09661 RNU6-533P-201ENST00000384144 107 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 RPS3AP36-201ENST00000398190 775 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 DSTNP4-201ENST00000399472 474 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 AC007742.1-201ENST00000425789 329 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 DPPA2P1-201ENST00000428060 556 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.82□□□□□ -1.64
SNRPA1P09661 RPL36P19-201ENST00000430744 301 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.82□□□□□ -1.64
SNRPA1P09661 ELOCP26-201ENST00000436067 329 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 SNRPEP7-201ENST00000438350 220 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.82□□□□□ -1.64
SNRPA1P09661 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.82□□□□□ -1.64
SNRPA1P09661 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.82□□□□□ -1.64
SNRPA1P09661 RPS3AP46-201ENST00000448352 682 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 AL590365.1-201ENST00000450788 243 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 FGF7P6-202ENST00000451282 293 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 snoU109.1-201ENST00000459339 135 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 AC084198.1-201ENST00000477747 402 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 AC005726.1-201ENST00000494679 427 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 TMEM251P1-201ENST00000503717 318 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 AC110768.1-201ENST00000509222 400 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.82□□□□□ -1.64
SNRPA1P09661 DEFB109D-201ENST00000529497 240 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 AC124947.2-202ENST00000552735 133 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.82□□□□□ -1.64
SNRPA1P09661 AC090877.1-201ENST00000561418 344 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 AL133457.1-201ENST00000564251 987 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 MIR548S-201ENST00000581352 82 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 MIR4637-201ENST00000582405 84 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 MAGOH2P-202ENST00000584384 429 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 AC233280.2-201ENST00000603917 1070 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 AC112191.3-201ENST00000604371 277 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 AL159169.3-201ENST00000608871 561 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 AC128687.2-201ENST00000609657 566 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 AC099654.13-201ENST00000639774 207 ntBASIC4.82□□□□□ -1.64
SNRPA1P09661 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNRPA1P09661 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SNRPA1P09661 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SNRPA1P09661 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNRPA1P09661 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNRPA1P09661 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNRPA1P09661 AC095050.2-201ENST00000510748 1458 ntBASIC4.81□□□□□ -1.64
SNRPA1P09661 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.81□□□□□ -1.64
SNRPA1P09661 UBE3AP2-201ENST00000429033 2259 ntBASIC4.81□□□□□ -1.64
SNRPA1P09661 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.81□□□□□ -1.64
SNRPA1P09661 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SNRPA1P09661 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
SNRPA1P09661 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNRPA1P09661 AC006378.2-201ENST00000623178 2476 ntBASIC4.81□□□□□ -1.64
SNRPA1P09661 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.81□□□□□ -1.64
SNRPA1P09661 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms