Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.27□□□□□ -2.05
COL4A2P08572 VTA1P1-201ENST00000414044 866 ntBASIC2.27□□□□□ -2.05
COL4A2P08572 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.27□□□□□ -2.05
COL4A2P08572 AL138785.1-201ENST00000425821 331 ntBASIC2.27□□□□□ -2.05
COL4A2P08572 AC092427.1-202ENST00000430569 476 ntBASIC2.27□□□□□ -2.05
COL4A2P08572 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.27□□□□□ -2.05
COL4A2P08572 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.27□□□□□ -2.05
COL4A2P08572 AL353093.1-201ENST00000441292 436 ntBASIC2.27□□□□□ -2.05
COL4A2P08572 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.27□□□□□ -2.05
COL4A2P08572 AC107398.1-201ENST00000486904 505 ntBASIC2.27□□□□□ -2.05
COL4A2P08572 OR9N1P-202ENST00000494289 481 ntBASIC2.27□□□□□ -2.05
COL4A2P08572 AC012170.1-201ENST00000495139 359 ntBASIC2.27□□□□□ -2.05
COL4A2P08572 AC025459.1-201ENST00000504072 156 ntBASIC2.27□□□□□ -2.05
COL4A2P08572 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.27□□□□□ -2.05
COL4A2P08572 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
COL4A2P08572 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.27□□□□□ -2.05
COL4A2P08572 NDUFB4P9-201ENST00000511646 388 ntBASIC2.27□□□□□ -2.05
COL4A2P08572 RNA5SP458-201ENST00000516188 119 ntBASIC2.27□□□□□ -2.05
COL4A2P08572 RNU6-826P-201ENST00000516827 104 ntBASIC2.27□□□□□ -2.05
COL4A2P08572 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.27□□□□□ -2.05
COL4A2P08572 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.27□□□□□ -2.05
COL4A2P08572 AC135628.1-201ENST00000568867 534 ntBASIC2.27□□□□□ -2.05
COL4A2P08572 MIR4458-201ENST00000578872 75 ntBASIC2.27□□□□□ -2.05
COL4A2P08572 AP003117.1-201ENST00000602771 554 ntBASIC2.27□□□□□ -2.05
COL4A2P08572 AC104820.1-201ENST00000624183 307 ntBASIC2.27□□□□□ -2.05
COL4A2P08572 AP003072.4-201ENST00000624580 310 ntBASIC2.27□□□□□ -2.05
COL4A2P08572 AC091152.2-201ENST00000591628 2569 ntBASIC2.27□□□□□ -2.05
COL4A2P08572 GABPAP-201ENST00000419271 1356 ntBASIC2.27□□□□□ -2.05
COL4A2P08572 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
COL4A2P08572 HSPA8P4-201ENST00000511877 1920 ntBASIC2.27□□□□□ -2.05
COL4A2P08572 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
COL4A2P08572 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.26□□□□□ -2.05
COL4A2P08572 RNU6-40P-201ENST00000384254 107 ntBASIC2.26□□□□□ -2.05
COL4A2P08572 SAR1AP2-201ENST00000392696 594 ntBASIC2.26□□□□□ -2.05
COL4A2P08572 HNRNPDP2-201ENST00000406475 478 ntBASIC2.26□□□□□ -2.05
COL4A2P08572 RNA5SP239-201ENST00000410218 129 ntBASIC2.26□□□□□ -2.05
COL4A2P08572 RNA5SP247-201ENST00000411181 105 ntBASIC2.26□□□□□ -2.05
COL4A2P08572 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.26□□□□□ -2.05
COL4A2P08572 RPS15AP28-201ENST00000435088 386 ntBASIC2.26□□□□□ -2.05
COL4A2P08572 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.26□□□□□ -2.05
COL4A2P08572 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.26□□□□□ -2.05
COL4A2P08572 AC008571.1-201ENST00000467232 300 ntBASIC2.26□□□□□ -2.05
COL4A2P08572 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.26□□□□□ -2.05
COL4A2P08572 FAM92A1P2-202ENST00000504766 877 ntBASIC2.26□□□□□ -2.05
COL4A2P08572 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.26□□□□□ -2.05
COL4A2P08572 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.26□□□□□ -2.05
COL4A2P08572 AK6P1-201ENST00000540219 478 ntBASIC2.26□□□□□ -2.05
COL4A2P08572 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.26□□□□□ -2.05
COL4A2P08572 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC2.26□□□□□ -2.05
COL4A2P08572 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.26□□□□□ -2.05
COL4A2P08572 AC044913.1-201ENST00000557200 430 ntBASIC2.26□□□□□ -2.05
COL4A2P08572 AC008432.1-201ENST00000615912 1320 ntBASIC2.26□□□□□ -2.05
COL4A2P08572 MIR1264-201ENST00000616374 69 ntBASIC2.26□□□□□ -2.05
COL4A2P08572 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.26□□□□□ -2.05
COL4A2P08572 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.26□□□□□ -2.05
COL4A2P08572 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
COL4A2P08572 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
COL4A2P08572 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
COL4A2P08572 RNA5SP99-201ENST00000364020 114 ntBASIC2.25□□□□□ -2.05
COL4A2P08572 U8.8-201ENST00000365399 135 ntBASIC2.25□□□□□ -2.05
COL4A2P08572 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
COL4A2P08572 SNORA17.3-201ENST00000391159 129 ntBASIC2.25□□□□□ -2.05
COL4A2P08572 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.25□□□□□ -2.05
COL4A2P08572 MTND4LP7-201ENST00000431728 294 ntBASIC2.25□□□□□ -2.05
COL4A2P08572 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.25□□□□□ -2.05
COL4A2P08572 CR769767.1-201ENST00000436337 346 ntBASIC2.25□□□□□ -2.05
COL4A2P08572 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.25□□□□□ -2.05
COL4A2P08572 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.25□□□□□ -2.05
COL4A2P08572 RPL39P40-201ENST00000445481 146 ntBASIC2.25□□□□□ -2.05
COL4A2P08572 AC009961.3-201ENST00000449832 765 ntBASIC2.25□□□□□ -2.05
COL4A2P08572 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
COL4A2P08572 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.25□□□□□ -2.05
COL4A2P08572 RN7SKP82-201ENST00000516786 223 ntBASIC2.25□□□□□ -2.05
COL4A2P08572 AC004486.1-201ENST00000546846 233 ntBASIC2.25□□□□□ -2.05
COL4A2P08572 AC027104.1-201ENST00000563702 681 ntBASIC2.25□□□□□ -2.05
COL4A2P08572 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.25□□□□□ -2.05
COL4A2P08572 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.25□□□□□ -2.05
COL4A2P08572 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.25□□□□□ -2.05
COL4A2P08572 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
COL4A2P08572 U6.48-201ENST00000618523 106 ntBASIC2.25□□□□□ -2.05
COL4A2P08572 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
COL4A2P08572 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.25□□□□□ -2.05
COL4A2P08572 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.25□□□□□ -2.05
COL4A2P08572 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
COL4A2P08572 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.25□□□□□ -2.05
COL4A2P08572 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
COL4A2P08572 XIAPP3-201ENST00000312918 795 ntBASIC2.25□□□□□ -2.05
COL4A2P08572 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.25□□□□□ -2.05
COL4A2P08572 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
COL4A2P08572 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.25□□□□□ -2.05
COL4A2P08572 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.25□□□□□ -2.05
COL4A2P08572 UBE2V1P5-201ENST00000440070 405 ntBASIC2.25□□□□□ -2.05
COL4A2P08572 NPM1P49-201ENST00000448027 714 ntBASIC2.25□□□□□ -2.05
COL4A2P08572 NDUFS5P3-201ENST00000450668 321 ntBASIC2.25□□□□□ -2.05
COL4A2P08572 AC004263.1-201ENST00000479327 332 ntBASIC2.25□□□□□ -2.05
COL4A2P08572 RPL30P11-201ENST00000495304 339 ntBASIC2.25□□□□□ -2.05
COL4A2P08572 SCARNA16.3-201ENST00000516595 184 ntBASIC2.25□□□□□ -2.05
COL4A2P08572 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
COL4A2P08572 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.25□□□□□ -2.05
COL4A2P08572 AC012414.2-201ENST00000559474 187 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms