Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.9□□□□□ -1.79
RB1P06400 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
RB1P06400 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.9□□□□□ -1.79
RB1P06400 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.9□□□□□ -1.79
RB1P06400 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.9□□□□□ -1.79
RB1P06400 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.9□□□□□ -1.79
RB1P06400 UBTFL10-201ENST00000528532 562 ntBASIC3.9□□□□□ -1.79
RB1P06400 DUXAP5-201ENST00000529668 529 ntBASIC3.9□□□□□ -1.79
RB1P06400 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.9□□□□□ -1.79
RB1P06400 AC106782.4-201ENST00000568264 210 ntBASIC3.9□□□□□ -1.79
RB1P06400 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.9□□□□□ -1.79
RB1P06400 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.9□□□□□ -1.79
RB1P06400 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
RB1P06400 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.9□□□□□ -1.79
RB1P06400 NIFKP6-201ENST00000598115 845 ntBASIC3.9□□□□□ -1.79
RB1P06400 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.9□□□□□ -1.79
RB1P06400 AL163642.2-201ENST00000604722 1019 ntBASIC3.9□□□□□ -1.79
RB1P06400 AC079684.1-201ENST00000621405 437 ntBASIC3.9□□□□□ -1.79
RB1P06400 AL445264.1-201ENST00000621719 171 ntBASIC3.9□□□□□ -1.79
RB1P06400 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.9□□□□□ -1.79
RB1P06400 AL133383.2-201ENST00000622958 2336 ntBASIC3.9□□□□□ -1.79
RB1P06400 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RB1P06400 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RB1P06400 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.9□□□□□ -1.79
RB1P06400 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RB1P06400 GABPAP-201ENST00000419271 1356 ntBASIC3.89□□□□□ -1.79
RB1P06400 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RB1P06400 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.89□□□□□ -1.79
RB1P06400 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
RB1P06400 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RB1P06400 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.89□□□□□ -1.79
RB1P06400 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RB1P06400 RNU6-343P-201ENST00000364709 104 ntBASIC3.89□□□□□ -1.79
RB1P06400 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.89□□□□□ -1.79
RB1P06400 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RB1P06400 RNU6-1200P-201ENST00000384162 107 ntBASIC3.89□□□□□ -1.79
RB1P06400 RNU6-712P-201ENST00000410558 100 ntBASIC3.89□□□□□ -1.79
RB1P06400 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.89□□□□□ -1.79
RB1P06400 AC098592.1-201ENST00000419352 333 ntBASIC3.89□□□□□ -1.79
RB1P06400 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.89□□□□□ -1.79
RB1P06400 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.89□□□□□ -1.79
RB1P06400 ATP5JP1-201ENST00000431631 322 ntBASIC3.89□□□□□ -1.79
RB1P06400 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.89□□□□□ -1.79
RB1P06400 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.89□□□□□ -1.79
RB1P06400 SDCBPP1-201ENST00000440192 890 ntBASIC3.89□□□□□ -1.79
RB1P06400 MTND5P14-201ENST00000441481 1267 ntBASIC3.89□□□□□ -1.79
RB1P06400 MTCYBP3-201ENST00000445588 1137 ntBASIC3.89□□□□□ -1.79
RB1P06400 AL606662.1-201ENST00000445763 553 ntBASIC3.89□□□□□ -1.79
RB1P06400 BX322784.1-201ENST00000455793 1077 ntBASIC3.89□□□□□ -1.79
RB1P06400 RPL23AP62-201ENST00000463396 453 ntBASIC3.89□□□□□ -1.79
RB1P06400 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.89□□□□□ -1.79
RB1P06400 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.89□□□□□ -1.79
RB1P06400 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.89□□□□□ -1.79
RB1P06400 COX7A2P2-201ENST00000505291 250 ntBASIC3.89□□□□□ -1.79
RB1P06400 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.89□□□□□ -1.79
RB1P06400 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.89□□□□□ -1.79
RB1P06400 HSPE1P23-201ENST00000509838 286 ntBASIC3.89□□□□□ -1.79
RB1P06400 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RB1P06400 RNU6-1129P-201ENST00000515964 104 ntBASIC3.89□□□□□ -1.79
RB1P06400 MTATP6P15-201ENST00000527233 835 ntBASIC3.89□□□□□ -1.79
RB1P06400 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.89□□□□□ -1.79
RB1P06400 AP000926.4-201ENST00000527351 454 ntBASIC3.89□□□□□ -1.79
RB1P06400 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.89□□□□□ -1.79
RB1P06400 OR5D17P-201ENST00000531492 978 ntBASIC3.89□□□□□ -1.79
RB1P06400 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
RB1P06400 ELOCP32-201ENST00000548625 324 ntBASIC3.89□□□□□ -1.79
RB1P06400 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.89□□□□□ -1.79
RB1P06400 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.89□□□□□ -1.79
RB1P06400 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.89□□□□□ -1.79
RB1P06400 AL353778.1-201ENST00000603149 408 ntBASIC3.89□□□□□ -1.79
RB1P06400 AL390208.1-201ENST00000605885 644 ntBASIC3.89□□□□□ -1.79
RB1P06400 AL596245.1-201ENST00000618994 362 ntBASIC3.89□□□□□ -1.79
RB1P06400 AC131159.1-201ENST00000621854 213 ntBASIC3.89□□□□□ -1.79
RB1P06400 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.89□□□□□ -1.79
RB1P06400 AC011477.1-204ENST00000623416 1325 ntBASIC3.89□□□□□ -1.79
RB1P06400 AC058791.1-201ENST00000608412 3198 ntBASIC3.89□□□□□ -1.79
RB1P06400 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RB1P06400 AF127577.6-201ENST00000623352 2191 ntBASIC3.89□□□□□ -1.79
RB1P06400 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.89□□□□□ -1.79
RB1P06400 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RB1P06400 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RB1P06400 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RB1P06400 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RB1P06400 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RB1P06400 RNU6-28P-201ENST00000362378 107 ntBASIC3.88□□□□□ -1.79
RB1P06400 AL590084.2-201ENST00000401481 382 ntBASIC3.88□□□□□ -1.79
RB1P06400 CYCSP45-201ENST00000402289 315 ntBASIC3.88□□□□□ -1.79
RB1P06400 RNA5SP306-201ENST00000411087 107 ntBASIC3.88□□□□□ -1.79
RB1P06400 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.88□□□□□ -1.79
RB1P06400 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.88□□□□□ -1.79
RB1P06400 AL035407.1-201ENST00000429211 571 ntBASIC3.88□□□□□ -1.79
RB1P06400 RPL21P112-201ENST00000434403 463 ntBASIC3.88□□□□□ -1.79
RB1P06400 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.88□□□□□ -1.79
RB1P06400 AC010655.1-201ENST00000449336 292 ntBASIC3.88□□□□□ -1.79
RB1P06400 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.88□□□□□ -1.79
RB1P06400 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.88□□□□□ -1.79
RB1P06400 RPL31P61-201ENST00000496160 376 ntBASIC3.88□□□□□ -1.79
RB1P06400 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.88□□□□□ -1.79
RB1P06400 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.88□□□□□ -1.79
RB1P06400 HMGB1P22-201ENST00000505315 124 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms