Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ZNF285B-201ENST00000561698 1767 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 AC009487.2-201ENST00000420969 6821 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 RNU6-50P-201ENST00000362356 103 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 RNA5SP197-201ENST00000363357 119 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 RNA5SP51-201ENST00000364750 119 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
HLA-DQA1P01909 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
HLA-DQA1P01909 SAR1AP2-201ENST00000392696 594 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 DHFRP6-201ENST00000401776 268 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DQA1P01909 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DQA1P01909 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DQA1P01909 AC099677.1-201ENST00000420575 175 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 UBE2D3P2-201ENST00000424409 445 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DQA1P01909 MUPP-201ENST00000438111 566 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 RPL23AP76-201ENST00000441860 458 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DQA1P01909 RPL36AP33-201ENST00000450395 310 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 TRGVB-201ENST00000453257 471 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DQA1P01909 AC008571.1-201ENST00000467232 300 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DQA1P01909 RPS15AP17-201ENST00000470598 390 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DQA1P01909 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DQA1P01909 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DQA1P01909 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DQA1P01909 TMEM251P1-201ENST00000503717 318 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DQA1P01909 AC108043.1-201ENST00000512696 574 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 RN7SKP13-201ENST00000515933 244 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 SNORA31.8-201ENST00000516327 108 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 SNORA70.18-201ENST00000516696 98 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 RNA5SP468-201ENST00000516782 93 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 RN7SKP282-201ENST00000516824 299 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 RNU6-826P-201ENST00000516827 104 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 GTF2IP22-201ENST00000554443 182 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 BNIP3P5-201ENST00000562290 498 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DQA1P01909 AL132657.2-201ENST00000564417 358 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DQA1P01909 AC006504.3-201ENST00000586818 523 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 AC006116.10-201ENST00000591836 581 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DQA1P01909 BDH2P1-201ENST00000602288 736 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 AC010738.1-201ENST00000604970 987 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 U3.45-201ENST00000607547 219 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 AC097504.2-201ENST00000608088 454 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 AL136370.1-201ENST00000608166 691 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DQA1P01909 Z99129.2-201ENST00000619967 314 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 AL360181.4-201ENST00000621752 134 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 AC095031.1-201ENST00000623685 672 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 OR1S1-201ENST00000624470 978 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 AL445984.1-201ENST00000637834 659 ntBASIC2.38□□□□□ -2.03
HLA-DQA1P01909 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DQA1P01909 AL645937.1-201ENST00000641739 1652 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 SNORD9-201ENST00000362566 104 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 CYCSP45-201ENST00000402289 315 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AC245052.5-201ENST00000416320 649 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AL354692.1-201ENST00000423044 315 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AC007742.1-201ENST00000425789 329 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 MTCO1P39-201ENST00000426148 480 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 SAR1AP4-201ENST00000429225 591 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AL590233.1-201ENST00000430017 456 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 ELOCP26-201ENST00000436067 329 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AL358794.1-201ENST00000445689 381 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 EXOSC3P1-201ENST00000448649 500 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AC026410.2-201ENST00000460281 156 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AP001992.1-205ENST00000462248 379 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 RPL21P8-201ENST00000465083 535 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 RN7SL633P-201ENST00000488974 297 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 MLLT10P2-201ENST00000506434 249 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 FCF1P8-201ENST00000510322 597 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AC010625.1-201ENST00000511296 403 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 OR5AK1P-201ENST00000524837 922 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 HIGD1AP17-201ENST00000554576 276 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms