Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AC107083.1-201ENST00000439643 279 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.32□□□□□ -2.04
CPSF4O95639 AC104389.3-201ENST00000445629 235 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.32□□□□□ -2.04
CPSF4O95639 AL513328.1-201ENST00000446460 224 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 GXYLT1P1-201ENST00000446657 490 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.32□□□□□ -2.04
CPSF4O95639 AC006445.2-201ENST00000510061 472 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 PRELID3BP4-201ENST00000515476 571 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 AC124293.1-201ENST00000530034 493 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.32□□□□□ -2.04
CPSF4O95639 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.32□□□□□ -2.04
CPSF4O95639 AC011611.5-201ENST00000552477 578 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.32□□□□□ -2.04
CPSF4O95639 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.32□□□□□ -2.04
CPSF4O95639 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.32□□□□□ -2.04
CPSF4O95639 AC061975.8-201ENST00000587058 721 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.32□□□□□ -2.04
CPSF4O95639 BNIP3P33-201ENST00000598912 569 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 SNRPGP15-201ENST00000600149 222 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 AL020997.3-201ENST00000602843 359 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CPSF4O95639 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.32□□□□□ -2.04
CPSF4O95639 AC002546.1-201ENST00000588041 2504 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CPSF4O95639 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.32□□□□□ -2.04
CPSF4O95639 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
CPSF4O95639 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CPSF4O95639 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CPSF4O95639 RNVU1-3-201ENST00000364313 161 ntBASIC2.31□□□□□ -2.04
CPSF4O95639 SNORA70.4-201ENST00000365509 134 ntBASIC2.31□□□□□ -2.04
CPSF4O95639 SNORA41-201ENST00000384675 132 ntBASIC2.31□□□□□ -2.04
CPSF4O95639 MIR34A-201ENST00000385130 110 ntBASIC2.31□□□□□ -2.04
CPSF4O95639 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.31□□□□□ -2.04
CPSF4O95639 EI24P1-201ENST00000416584 867 ntBASIC2.31□□□□□ -2.04
CPSF4O95639 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.31□□□□□ -2.04
CPSF4O95639 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.31□□□□□ -2.04
CPSF4O95639 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.31□□□□□ -2.04
CPSF4O95639 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.31□□□□□ -2.04
CPSF4O95639 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.31□□□□□ -2.04
CPSF4O95639 AL158053.1-201ENST00000441503 453 ntBASIC2.31□□□□□ -2.04
CPSF4O95639 RPS26P56-201ENST00000444468 240 ntBASIC2.31□□□□□ -2.04
CPSF4O95639 MOB1AP2-201ENST00000446060 614 ntBASIC2.31□□□□□ -2.04
CPSF4O95639 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.31□□□□□ -2.04
CPSF4O95639 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.31□□□□□ -2.04
CPSF4O95639 AC008379.1-201ENST00000463655 464 ntBASIC2.31□□□□□ -2.04
CPSF4O95639 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.31□□□□□ -2.04
CPSF4O95639 AC008628.1-201ENST00000508663 265 ntBASIC2.31□□□□□ -2.04
CPSF4O95639 RN7SKP24-201ENST00000515888 284 ntBASIC2.31□□□□□ -2.04
CPSF4O95639 RNU6-334P-201ENST00000517072 102 ntBASIC2.31□□□□□ -2.04
CPSF4O95639 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.31□□□□□ -2.04
CPSF4O95639 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.31□□□□□ -2.04
CPSF4O95639 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.31□□□□□ -2.04
CPSF4O95639 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.31□□□□□ -2.04
CPSF4O95639 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.31□□□□□ -2.04
CPSF4O95639 OR4G1P-201ENST00000588632 938 ntBASIC2.31□□□□□ -2.04
CPSF4O95639 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.31□□□□□ -2.04
CPSF4O95639 AC133794.1-201ENST00000602731 914 ntBASIC2.31□□□□□ -2.04
CPSF4O95639 AC092474.3-201ENST00000603022 568 ntBASIC2.31□□□□□ -2.04
CPSF4O95639 HSPE1P14-201ENST00000605812 302 ntBASIC2.31□□□□□ -2.04
CPSF4O95639 OR2AS2P-201ENST00000606902 342 ntBASIC2.31□□□□□ -2.04
CPSF4O95639 AC016542.1-201ENST00000608259 493 ntBASIC2.31□□□□□ -2.04
CPSF4O95639 AP004247.3-201ENST00000608682 624 ntBASIC2.31□□□□□ -2.04
CPSF4O95639 AL137847.3-201ENST00000611521 109 ntBASIC2.31□□□□□ -2.04
CPSF4O95639 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
CPSF4O95639 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.31□□□□□ -2.04
CPSF4O95639 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.31□□□□□ -2.04
CPSF4O95639 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
CPSF4O95639 AL359893.1-201ENST00000447628 1580 ntBASIC2.31□□□□□ -2.04
CPSF4O95639 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.31□□□□□ -2.04
CPSF4O95639 AC069528.2-201ENST00000624849 1991 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CPSF4O95639 FRG1BP-201ENST00000278882 761 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CPSF4O95639 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.3□□□□□ -2.04
CPSF4O95639 Y_RNA.110-201ENST00000363220 99 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 SNORA51.2-201ENST00000364595 132 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 RNU6-444P-201ENST00000383988 108 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 MIR196B-201ENST00000384852 84 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CPSF4O95639 RNU2-72P-201ENST00000411175 163 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.3□□□□□ -2.04
CPSF4O95639 AC019070.1-201ENST00000415008 1024 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 AL096701.2-201ENST00000416920 238 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 RPS3AP9-201ENST00000417027 792 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 COTL1P1-201ENST00000422309 375 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.3□□□□□ -2.04
CPSF4O95639 RPP40P1-201ENST00000426762 456 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 DEFB130D-201ENST00000426866 237 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.3□□□□□ -2.04
CPSF4O95639 AC104308.1-201ENST00000454621 333 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 AC027673.1-201ENST00000456245 405 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 CDC42P1-201ENST00000456658 548 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 ARPC3P2-201ENST00000457786 533 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.3□□□□□ -2.04
CPSF4O95639 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.3□□□□□ -2.04
CPSF4O95639 MTCO2P9-201ENST00000503214 694 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 AC098799.2-201ENST00000509466 868 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms