Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.01□□□□□ -1.77
RTN3O95197 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
RTN3O95197 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RTN3O95197 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RTN3O95197 AC092447.10-201ENST00000620607 1652 ntBASIC4.01□□□□□ -1.77
RTN3O95197 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RTN3O95197 RNU6-359P-201ENST00000365466 108 ntBASIC4.01□□□□□ -1.77
RTN3O95197 RNU6-744P-201ENST00000365557 107 ntBASIC4.01□□□□□ -1.77
RTN3O95197 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.01□□□□□ -1.77
RTN3O95197 RNU6-1316P-201ENST00000384242 108 ntBASIC4.01□□□□□ -1.77
RTN3O95197 RN7SKP266-201ENST00000410232 287 ntBASIC4.01□□□□□ -1.77
RTN3O95197 AC107081.1-201ENST00000414975 361 ntBASIC4.01□□□□□ -1.77
RTN3O95197 CRYBB2P1-203ENST00000415709 538 ntBASIC4.01□□□□□ -1.77
RTN3O95197 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.01□□□□□ -1.77
RTN3O95197 AL117351.1-201ENST00000438864 766 ntBASIC4.01□□□□□ -1.77
RTN3O95197 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.01□□□□□ -1.77
RTN3O95197 AL121871.1-201ENST00000443413 436 ntBASIC4.01□□□□□ -1.77
RTN3O95197 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.01□□□□□ -1.77
RTN3O95197 SETD6P1-201ENST00000444575 317 ntBASIC4.01□□□□□ -1.77
RTN3O95197 OR6K5P-201ENST00000447050 945 ntBASIC4.01□□□□□ -1.77
RTN3O95197 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.01□□□□□ -1.77
RTN3O95197 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.01□□□□□ -1.77
RTN3O95197 AL133162.1-201ENST00000463228 453 ntBASIC4.01□□□□□ -1.77
RTN3O95197 HMGB1P36-201ENST00000487709 576 ntBASIC4.01□□□□□ -1.77
RTN3O95197 KLHL2P1-201ENST00000508691 521 ntBASIC4.01□□□□□ -1.77
RTN3O95197 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.01□□□□□ -1.77
RTN3O95197 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.01□□□□□ -1.77
RTN3O95197 MTND5P4-201ENST00000514978 288 ntBASIC4.01□□□□□ -1.77
RTN3O95197 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.01□□□□□ -1.77
RTN3O95197 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.01□□□□□ -1.77
RTN3O95197 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.01□□□□□ -1.77
RTN3O95197 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.01□□□□□ -1.77
RTN3O95197 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.01□□□□□ -1.77
RTN3O95197 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.01□□□□□ -1.77
RTN3O95197 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.01□□□□□ -1.77
RTN3O95197 MIR5187-201ENST00000583479 76 ntBASIC4.01□□□□□ -1.77
RTN3O95197 MIR3158-1-201ENST00000583596 81 ntBASIC4.01□□□□□ -1.77
RTN3O95197 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.01□□□□□ -1.77
RTN3O95197 AC008751.2-201ENST00000597885 980 ntBASIC4.01□□□□□ -1.77
RTN3O95197 AL139344.1-201ENST00000605228 195 ntBASIC4.01□□□□□ -1.77
RTN3O95197 AL391497.1-201ENST00000608671 547 ntBASIC4.01□□□□□ -1.77
RTN3O95197 AL590099.1-201ENST00000615276 138 ntBASIC4.01□□□□□ -1.77
RTN3O95197 AC006133.1-201ENST00000617106 264 ntBASIC4.01□□□□□ -1.77
RTN3O95197 CR392039.5-201ENST00000623201 510 ntBASIC4.01□□□□□ -1.77
RTN3O95197 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.01□□□□□ -1.77
RTN3O95197 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.01□□□□□ -1.77
RTN3O95197 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RTN3O95197 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.01□□□□□ -1.77
RTN3O95197 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RTN3O95197 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
RTN3O95197 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RTN3O95197 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
RTN3O95197 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
RTN3O95197 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RTN3O95197 MAPK10-373ENST00000641983 6772 ntBASIC4□□□□□ -1.77
RTN3O95197 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4□□□□□ -1.77
RTN3O95197 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4□□□□□ -1.77
RTN3O95197 RNU6-433P-201ENST00000363216 104 ntBASIC4□□□□□ -1.77
RTN3O95197 RNU6-97P-201ENST00000363387 104 ntBASIC4□□□□□ -1.77
RTN3O95197 Y_RNA.302-201ENST00000364997 102 ntBASIC4□□□□□ -1.77
RTN3O95197 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RTN3O95197 RNU5A-2P-201ENST00000384337 116 ntBASIC4□□□□□ -1.77
RTN3O95197 AL356421.1-201ENST00000403255 413 ntBASIC4□□□□□ -1.77
RTN3O95197 RPS15AP38-201ENST00000413110 372 ntBASIC4□□□□□ -1.77
RTN3O95197 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4□□□□□ -1.77
RTN3O95197 DNAJA1P2-201ENST00000421360 1197 ntBASIC4□□□□□ -1.77
RTN3O95197 AC079780.1-201ENST00000428259 207 ntBASIC4□□□□□ -1.77
RTN3O95197 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4□□□□□ -1.77
RTN3O95197 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4□□□□□ -1.77
RTN3O95197 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4□□□□□ -1.77
RTN3O95197 MTCO3P16-201ENST00000454456 754 ntBASIC4□□□□□ -1.77
RTN3O95197 MTCO2P6-201ENST00000463134 685 ntBASIC4□□□□□ -1.77
RTN3O95197 ACTR3P3-201ENST00000480448 893 ntBASIC4□□□□□ -1.77
RTN3O95197 RPS4XP13-201ENST00000483219 789 ntBASIC4□□□□□ -1.77
RTN3O95197 AP001025.2-201ENST00000490908 477 ntBASIC4□□□□□ -1.77
RTN3O95197 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4□□□□□ -1.77
RTN3O95197 AC026726.1-201ENST00000512859 601 ntBASIC4□□□□□ -1.77
RTN3O95197 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4□□□□□ -1.77
RTN3O95197 SNORA67.7-201ENST00000516664 135 ntBASIC4□□□□□ -1.77
RTN3O95197 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4□□□□□ -1.77
RTN3O95197 AC087276.1-201ENST00000529659 480 ntBASIC4□□□□□ -1.77
RTN3O95197 AC068587.4-201ENST00000533893 186 ntBASIC4□□□□□ -1.77
RTN3O95197 AC145350.1-201ENST00000567426 208 ntBASIC4□□□□□ -1.77
RTN3O95197 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4□□□□□ -1.77
RTN3O95197 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4□□□□□ -1.77
RTN3O95197 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4□□□□□ -1.77
RTN3O95197 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4□□□□□ -1.77
RTN3O95197 AC011451.2-201ENST00000604303 598 ntBASIC4□□□□□ -1.77
RTN3O95197 AC092354.2-201ENST00000607786 514 ntBASIC4□□□□□ -1.77
RTN3O95197 AL592295.2-201ENST00000612578 206 ntBASIC4□□□□□ -1.77
RTN3O95197 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4□□□□□ -1.77
RTN3O95197 AC039056.2-201ENST00000622261 511 ntBASIC4□□□□□ -1.77
RTN3O95197 AC097520.1-201ENST00000624435 385 ntBASIC4□□□□□ -1.77
RTN3O95197 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4□□□□□ -1.77
RTN3O95197 OR8B1P-202ENST00000641132 1178 ntBASIC4□□□□□ -1.77
RTN3O95197 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4□□□□□ -1.77
RTN3O95197 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4□□□□□ -1.77
RTN3O95197 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4□□□□□ -1.77
RTN3O95197 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4□□□□□ -1.77
RTN3O95197 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms