Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.57□□□□□ -1.52
GRIN3BO60391 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.57□□□□□ -1.52
GRIN3BO60391 IFITM8P-201ENST00000522529 394 ntBASIC5.57□□□□□ -1.52
GRIN3BO60391 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.57□□□□□ -1.52
GRIN3BO60391 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.57□□□□□ -1.52
GRIN3BO60391 SETP2-201ENST00000553886 926 ntBASIC5.57□□□□□ -1.52
GRIN3BO60391 AL442663.2-201ENST00000554385 511 ntBASIC5.57□□□□□ -1.52
GRIN3BO60391 MIR4660-201ENST00000583549 74 ntBASIC5.57□□□□□ -1.52
GRIN3BO60391 PRPF19P1-201ENST00000584766 898 ntBASIC5.57□□□□□ -1.52
GRIN3BO60391 VN1R80P-201ENST00000597126 338 ntBASIC5.57□□□□□ -1.52
GRIN3BO60391 AL357559.1-201ENST00000622228 274 ntBASIC5.57□□□□□ -1.52
GRIN3BO60391 AL356585.4-201ENST00000623078 1229 ntBASIC5.57□□□□□ -1.52
GRIN3BO60391 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.57□□□□□ -1.52
GRIN3BO60391 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
GRIN3BO60391 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
GRIN3BO60391 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
GRIN3BO60391 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
GRIN3BO60391 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GRIN3BO60391 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
GRIN3BO60391 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
GRIN3BO60391 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
GRIN3BO60391 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.56□□□□□ -1.52
GRIN3BO60391 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
GRIN3BO60391 RNU6-359P-201ENST00000365466 108 ntBASIC5.56□□□□□ -1.52
GRIN3BO60391 Y_RNA.460-201ENST00000384255 102 ntBASIC5.56□□□□□ -1.52
GRIN3BO60391 RPL7P60-201ENST00000397636 735 ntBASIC5.56□□□□□ -1.52
GRIN3BO60391 AL354719.1-201ENST00000406535 843 ntBASIC5.56□□□□□ -1.52
GRIN3BO60391 RN7SKP16-201ENST00000410180 299 ntBASIC5.56□□□□□ -1.52
GRIN3BO60391 AC099336.2-201ENST00000422457 254 ntBASIC5.56□□□□□ -1.52
GRIN3BO60391 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
GRIN3BO60391 AC006548.1-201ENST00000427470 102 ntBASIC5.56□□□□□ -1.52
GRIN3BO60391 AC137499.1-201ENST00000427602 88 ntBASIC5.56□□□□□ -1.52
GRIN3BO60391 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.56□□□□□ -1.52
GRIN3BO60391 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.56□□□□□ -1.52
GRIN3BO60391 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.56□□□□□ -1.52
GRIN3BO60391 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.56□□□□□ -1.52
GRIN3BO60391 RPL7AP61-201ENST00000443410 636 ntBASIC5.56□□□□□ -1.52
GRIN3BO60391 AC079781.2-201ENST00000446424 169 ntBASIC5.56□□□□□ -1.52
GRIN3BO60391 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.56□□□□□ -1.52
GRIN3BO60391 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
GRIN3BO60391 AC099560.2-201ENST00000457554 255 ntBASIC5.56□□□□□ -1.52
GRIN3BO60391 AL136126.1-201ENST00000473603 402 ntBASIC5.56□□□□□ -1.52
GRIN3BO60391 AC093278.1-201ENST00000494700 600 ntBASIC5.56□□□□□ -1.52
GRIN3BO60391 AC008958.1-201ENST00000511047 682 ntBASIC5.56□□□□□ -1.52
GRIN3BO60391 AC093853.1-201ENST00000515689 483 ntBASIC5.56□□□□□ -1.52
GRIN3BO60391 Y_RNA.701-201ENST00000516812 110 ntBASIC5.56□□□□□ -1.52
GRIN3BO60391 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.56□□□□□ -1.52
GRIN3BO60391 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.56□□□□□ -1.52
GRIN3BO60391 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.56□□□□□ -1.52
GRIN3BO60391 HSPE1P5-201ENST00000561489 272 ntBASIC5.56□□□□□ -1.52
GRIN3BO60391 AC090615.1-201ENST00000577519 154 ntBASIC5.56□□□□□ -1.52
GRIN3BO60391 MIR5685-201ENST00000579080 79 ntBASIC5.56□□□□□ -1.52
GRIN3BO60391 AC022106.2-201ENST00000620114 757 ntBASIC5.56□□□□□ -1.52
GRIN3BO60391 CR381572.1-201ENST00000625098 102 ntBASIC5.56□□□□□ -1.52
GRIN3BO60391 AC011755.1-201ENST00000623763 2049 ntBASIC5.56□□□□□ -1.52
GRIN3BO60391 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
GRIN3BO60391 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
GRIN3BO60391 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.56□□□□□ -1.52
GRIN3BO60391 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
GRIN3BO60391 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.56□□□□□ -1.52
GRIN3BO60391 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
GRIN3BO60391 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
GRIN3BO60391 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
GRIN3BO60391 AC104260.2-201ENST00000623551 3497 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 ELL2P4-201ENST00000446870 1376 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
GRIN3BO60391 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.55□□□□□ -1.52
GRIN3BO60391 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
GRIN3BO60391 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
GRIN3BO60391 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.55□□□□□ -1.52
GRIN3BO60391 AC114546.3-201ENST00000623582 1734 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
GRIN3BO60391 RNU6-1243P-201ENST00000364028 107 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 Y_RNA.234-201ENST00000364409 97 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 SNORD81.2-201ENST00000365153 76 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 Y_RNA.381-201ENST00000365666 102 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 RNU6-1207P-201ENST00000384343 107 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
GRIN3BO60391 AL590704.1-201ENST00000402856 794 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 RPL31P52-201ENST00000407532 367 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.55□□□□□ -1.52
GRIN3BO60391 PDCL2P1-201ENST00000419302 352 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 ELOCP4-201ENST00000420090 333 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC5.55□□□□□ -1.52
GRIN3BO60391 RGS17P1-201ENST00000423358 553 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.55□□□□□ -1.52
GRIN3BO60391 VTI1BP4-201ENST00000427516 527 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.55□□□□□ -1.52
GRIN3BO60391 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
GRIN3BO60391 CBWD4P-201ENST00000445695 655 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 AC007677.1-201ENST00000445757 515 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.55□□□□□ -1.52
GRIN3BO60391 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.55□□□□□ -1.52
GRIN3BO60391 snoU13.8-201ENST00000458890 104 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 AC021660.1-201ENST00000465006 554 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 PLGLA-201ENST00000465668 449 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.55□□□□□ -1.52
GRIN3BO60391 PCBP2P3-201ENST00000509726 843 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.55□□□□□ -1.52
GRIN3BO60391 SNORD60.2-201ENST00000516883 86 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms