Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AL356583.2-201ENST00000426536 280 ntBASIC4.64□□□□□ -1.67
PRPF3O43395 BX890604.2-201ENST00000427883 474 ntBASIC4.64□□□□□ -1.67
PRPF3O43395 AL589823.1-201ENST00000429577 183 ntBASIC4.64□□□□□ -1.67
PRPF3O43395 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.64□□□□□ -1.67
PRPF3O43395 OR4C10P-201ENST00000434991 931 ntBASIC4.64□□□□□ -1.67
PRPF3O43395 TBCAP1-201ENST00000436520 327 ntBASIC4.64□□□□□ -1.67
PRPF3O43395 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.64□□□□□ -1.67
PRPF3O43395 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.64□□□□□ -1.67
PRPF3O43395 AC099563.1-201ENST00000456086 418 ntBASIC4.64□□□□□ -1.67
PRPF3O43395 CFTRP1-201ENST00000456646 183 ntBASIC4.64□□□□□ -1.67
PRPF3O43395 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.64□□□□□ -1.67
PRPF3O43395 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.64□□□□□ -1.67
PRPF3O43395 AC109464.2-201ENST00000510242 943 ntBASIC4.64□□□□□ -1.67
PRPF3O43395 AC005921.1-201ENST00000510589 286 ntBASIC4.64□□□□□ -1.67
PRPF3O43395 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.64□□□□□ -1.67
PRPF3O43395 MTCO2P32-201ENST00000514865 403 ntBASIC4.64□□□□□ -1.67
PRPF3O43395 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF3O43395 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.64□□□□□ -1.67
PRPF3O43395 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.64□□□□□ -1.67
PRPF3O43395 AC091516.1-201ENST00000549191 703 ntBASIC4.64□□□□□ -1.67
PRPF3O43395 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.64□□□□□ -1.67
PRPF3O43395 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.64□□□□□ -1.67
PRPF3O43395 AC068790.3-201ENST00000602988 553 ntBASIC4.64□□□□□ -1.67
PRPF3O43395 AL359715.5-201ENST00000623431 443 ntBASIC4.64□□□□□ -1.67
PRPF3O43395 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF3O43395 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF3O43395 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
PRPF3O43395 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF3O43395 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF3O43395 AL645937.1-201ENST00000641739 1652 ntBASIC4.64□□□□□ -1.67
PRPF3O43395 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 AC027290.2-201ENST00000623210 18662 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PRPF3O43395 SNORD74.4-201ENST00000364129 80 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 SNORA51.2-201ENST00000364595 132 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 MIR708-201ENST00000390708 88 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 RPL7P25-201ENST00000404151 721 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 AL663109.1-201ENST00000411498 844 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 USP9YP13-201ENST00000417797 480 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 RPL36AP36-201ENST00000418616 301 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 AC006366.1-201ENST00000422002 759 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.63□□□□□ -1.67
PRPF3O43395 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.63□□□□□ -1.67
PRPF3O43395 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.63□□□□□ -1.67
PRPF3O43395 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.63□□□□□ -1.67
PRPF3O43395 RPS17P13-201ENST00000448974 407 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 AC010655.1-201ENST00000449336 292 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 AL451050.1-201ENST00000450126 415 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.63□□□□□ -1.67
PRPF3O43395 RPS24P6-201ENST00000452670 400 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PRPF3O43395 RPL31P13-201ENST00000484151 370 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.63□□□□□ -1.67
PRPF3O43395 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.63□□□□□ -1.67
PRPF3O43395 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.63□□□□□ -1.67
PRPF3O43395 AF131216.2-201ENST00000512316 564 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 NPM1P41-201ENST00000512920 831 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 AC017037.2-201ENST00000513850 890 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 AP003467.2-201ENST00000520175 319 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 MED28P5-201ENST00000528254 438 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 MTCYBP41-201ENST00000528913 1123 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.63□□□□□ -1.67
PRPF3O43395 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.63□□□□□ -1.67
PRPF3O43395 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.63□□□□□ -1.67
PRPF3O43395 AC060771.1-201ENST00000582031 164 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 AC005255.1-201ENST00000593748 216 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 AC121334.2-201ENST00000605387 271 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 RNU6-87P-201ENST00000607561 108 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 AC004908.2-201ENST00000609090 574 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 AC100793.4-201ENST00000613683 429 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 AP001506.1-201ENST00000615444 211 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 RNA5SP196-201ENST00000625967 102 ntBASIC4.63□□□□□ -1.67
PRPF3O43395 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.63□□□□□ -1.67
PRPF3O43395 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PRPF3O43395 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.63□□□□□ -1.67
PRPF3O43395 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
PRPF3O43395 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PRPF3O43395 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PRPF3O43395 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.62□□□□□ -1.67
PRPF3O43395 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PRPF3O43395 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.62□□□□□ -1.67
PRPF3O43395 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PRPF3O43395 RNA5SP399-201ENST00000364003 117 ntBASIC4.62□□□□□ -1.67
PRPF3O43395 RNU6-1042P-201ENST00000384204 107 ntBASIC4.62□□□□□ -1.67
PRPF3O43395 MIR1251-201ENST00000408552 70 ntBASIC4.62□□□□□ -1.67
PRPF3O43395 RNA5SP239-201ENST00000410218 129 ntBASIC4.62□□□□□ -1.67
PRPF3O43395 RNA5SP306-201ENST00000411087 107 ntBASIC4.62□□□□□ -1.67
PRPF3O43395 CDK8P2-201ENST00000415020 547 ntBASIC4.62□□□□□ -1.67
PRPF3O43395 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.62□□□□□ -1.67
PRPF3O43395 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.62□□□□□ -1.67
PRPF3O43395 AC011742.1-201ENST00000431448 434 ntBASIC4.62□□□□□ -1.67
PRPF3O43395 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.62□□□□□ -1.67
PRPF3O43395 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.62□□□□□ -1.67
PRPF3O43395 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.62□□□□□ -1.67
PRPF3O43395 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.62□□□□□ -1.67
PRPF3O43395 AC022447.1-201ENST00000515358 464 ntBASIC4.62□□□□□ -1.67
PRPF3O43395 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.62□□□□□ -1.67
PRPF3O43395 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.62□□□□□ -1.67
PRPF3O43395 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.62□□□□□ -1.67
PRPF3O43395 YPEL5P3-201ENST00000547227 352 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms