Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 MORF4L1P7-201ENST00000426038 703 ntBASIC2.09□□□□□ -2.07
HMGB3O15347 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.09□□□□□ -2.07
HMGB3O15347 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.09□□□□□ -2.07
HMGB3O15347 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGB3O15347 AL359073.1-201ENST00000448036 403 ntBASIC2.09□□□□□ -2.07
HMGB3O15347 MTND2P19-201ENST00000449129 1012 ntBASIC2.09□□□□□ -2.07
HMGB3O15347 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.09□□□□□ -2.07
HMGB3O15347 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGB3O15347 AC006445.1-201ENST00000491925 405 ntBASIC2.09□□□□□ -2.07
HMGB3O15347 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGB3O15347 OR5BM1P-201ENST00000512021 366 ntBASIC2.09□□□□□ -2.07
HMGB3O15347 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.09□□□□□ -2.07
HMGB3O15347 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.09□□□□□ -2.07
HMGB3O15347 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGB3O15347 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.09□□□□□ -2.07
HMGB3O15347 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.09□□□□□ -2.07
HMGB3O15347 CKS1BP7-201ENST00000522230 235 ntBASIC2.09□□□□□ -2.07
HMGB3O15347 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.09□□□□□ -2.07
HMGB3O15347 AC123904.3-201ENST00000547218 814 ntBASIC2.09□□□□□ -2.07
HMGB3O15347 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
HMGB3O15347 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGB3O15347 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGB3O15347 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGB3O15347 ACTR3BP3-201ENST00000565577 979 ntBASIC2.09□□□□□ -2.07
HMGB3O15347 MYL12BP1-201ENST00000569826 507 ntBASIC2.09□□□□□ -2.07
HMGB3O15347 MIR3609-201ENST00000582661 80 ntBASIC2.09□□□□□ -2.07
HMGB3O15347 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGB3O15347 AL136363.1-201ENST00000605349 337 ntBASIC2.09□□□□□ -2.07
HMGB3O15347 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.09□□□□□ -2.07
HMGB3O15347 AC068831.8-201ENST00000620171 435 ntBASIC2.09□□□□□ -2.07
HMGB3O15347 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.09□□□□□ -2.07
HMGB3O15347 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.09□□□□□ -2.07
HMGB3O15347 AC017104.5-201ENST00000637647 639 ntBASIC2.09□□□□□ -2.07
HMGB3O15347 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
HMGB3O15347 AC007342.9-201ENST00000623877 1385 ntBASIC2.09□□□□□ -2.08
HMGB3O15347 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
HMGB3O15347 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HMGB3O15347 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HMGB3O15347 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HMGB3O15347 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
HMGB3O15347 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.08□□□□□ -2.08
HMGB3O15347 AL139276.1-201ENST00000311910 1001 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HMGB3O15347 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGB3O15347 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HMGB3O15347 SNORA57.1-201ENST00000391227 145 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 MIR1193-201ENST00000408109 78 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 AC092745.2-202ENST00000411880 369 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 UBE2V1P9-201ENST00000414760 368 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HMGB3O15347 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGB3O15347 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.08□□□□□ -2.08
HMGB3O15347 AL365496.1-201ENST00000426885 215 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 AC005326.1-201ENST00000429197 123 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 AC112220.1-201ENST00000434628 355 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 PDSS1P2-201ENST00000449397 678 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 AC104073.1-201ENST00000451988 151 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 AC090096.1-201ENST00000489168 390 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 RN7SL504P-201ENST00000494496 287 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 CEACAMP10-202ENST00000495431 496 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGB3O15347 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGB3O15347 AC093281.2-201ENST00000510153 597 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 AC113155.1-201ENST00000511141 769 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 RNA5SP82-201ENST00000516707 92 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 AC087808.1-201ENST00000520501 361 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGB3O15347 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGB3O15347 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HMGB3O15347 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.08□□□□□ -2.08
HMGB3O15347 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.08□□□□□ -2.08
HMGB3O15347 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.08□□□□□ -2.08
HMGB3O15347 AC025281.1-201ENST00000567026 265 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 MIR4700-201ENST00000578311 74 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 AL035413.2-201ENST00000604801 525 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 AL137847.3-201ENST00000611521 109 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 MIR6895-201ENST00000613497 78 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 STMN1P1-201ENST00000617809 440 ntBASIC2.08□□□□□ -2.08
HMGB3O15347 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HMGB3O15347 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.08□□□□□ -2.08
HMGB3O15347 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.08□□□□□ -2.08
HMGB3O15347 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
HMGB3O15347 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HMGB3O15347 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HMGB3O15347 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.08□□□□□ -2.08
HMGB3O15347 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.08□□□□□ -2.08
HMGB3O15347 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HMGB3O15347 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.07□□□□□ -2.08
HMGB3O15347 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.07□□□□□ -2.08
HMGB3O15347 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
HMGB3O15347 SNORA63.1-201ENST00000362493 131 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HMGB3O15347 RNU6-1072P-201ENST00000384703 107 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 RNU6-443P-201ENST00000384780 107 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 AL136372.1-201ENST00000403060 228 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.07□□□□□ -2.08
HMGB3O15347 RNU2-40P-201ENST00000410833 196 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGB3O15347 AL592148.1-201ENST00000413568 445 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms