Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 AP003355.3-201ENST00000623465 114 ntBASIC4.48□□□□□ -1.69
NPHP1O15259 ZNF876P-202ENST00000398732 1485 ntBASIC4.48□□□□□ -1.69
NPHP1O15259 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
NPHP1O15259 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
NPHP1O15259 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
NPHP1O15259 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NPHP1O15259 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NPHP1O15259 RNU6-343P-201ENST00000364709 104 ntBASIC4.47□□□□□ -1.69
NPHP1O15259 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.47□□□□□ -1.69
NPHP1O15259 HLFP1-201ENST00000402375 499 ntBASIC4.47□□□□□ -1.69
NPHP1O15259 AL356131.1-201ENST00000405826 414 ntBASIC4.47□□□□□ -1.69
NPHP1O15259 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.47□□□□□ -1.69
NPHP1O15259 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.47□□□□□ -1.69
NPHP1O15259 SDCBPP1-201ENST00000440192 890 ntBASIC4.47□□□□□ -1.69
NPHP1O15259 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.47□□□□□ -1.69
NPHP1O15259 Z73417.1-201ENST00000447373 778 ntBASIC4.47□□□□□ -1.69
NPHP1O15259 RPL31P50-201ENST00000471002 296 ntBASIC4.47□□□□□ -1.69
NPHP1O15259 NIPA2P2-201ENST00000496376 1083 ntBASIC4.47□□□□□ -1.69
NPHP1O15259 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.47□□□□□ -1.69
NPHP1O15259 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.47□□□□□ -1.69
NPHP1O15259 USP9YP5-201ENST00000511770 630 ntBASIC4.47□□□□□ -1.69
NPHP1O15259 AC092851.1-201ENST00000535964 478 ntBASIC4.47□□□□□ -1.69
NPHP1O15259 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.47□□□□□ -1.69
NPHP1O15259 CR383656.7-201ENST00000548164 174 ntBASIC4.47□□□□□ -1.69
NPHP1O15259 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.47□□□□□ -1.69
NPHP1O15259 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.47□□□□□ -1.69
NPHP1O15259 AC004853.1-201ENST00000604902 698 ntBASIC4.47□□□□□ -1.69
NPHP1O15259 AL592221.1-201ENST00000605266 382 ntBASIC4.47□□□□□ -1.69
NPHP1O15259 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.47□□□□□ -1.69
NPHP1O15259 MIR8057-201ENST00000620957 69 ntBASIC4.47□□□□□ -1.69
NPHP1O15259 AL445264.1-201ENST00000621719 171 ntBASIC4.47□□□□□ -1.69
NPHP1O15259 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.47□□□□□ -1.69
NPHP1O15259 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
NPHP1O15259 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.47□□□□□ -1.69
NPHP1O15259 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.47□□□□□ -1.69
NPHP1O15259 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
NPHP1O15259 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.46□□□□□ -1.69
NPHP1O15259 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
NPHP1O15259 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
NPHP1O15259 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
NPHP1O15259 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NPHP1O15259 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NPHP1O15259 AL672296.1-201ENST00000427780 2158 ntBASIC4.46□□□□□ -1.7
NPHP1O15259 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.46□□□□□ -1.7
NPHP1O15259 AC066616.2-201ENST00000559334 1481 ntBASIC4.46□□□□□ -1.7
NPHP1O15259 DDX43P2-201ENST00000604753 1354 ntBASIC4.46□□□□□ -1.7
NPHP1O15259 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NPHP1O15259 OR5H2-201ENST00000355273 945 ntBASIC4.46□□□□□ -1.7
NPHP1O15259 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NPHP1O15259 USP9YP33-201ENST00000412220 421 ntBASIC4.46□□□□□ -1.7
NPHP1O15259 PTP4A1P5-201ENST00000420305 455 ntBASIC4.46□□□□□ -1.7
NPHP1O15259 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.46□□□□□ -1.7
NPHP1O15259 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.46□□□□□ -1.7
NPHP1O15259 USP9YP35-201ENST00000435696 412 ntBASIC4.46□□□□□ -1.7
NPHP1O15259 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.46□□□□□ -1.7
NPHP1O15259 BX322784.1-201ENST00000455793 1077 ntBASIC4.46□□□□□ -1.7
NPHP1O15259 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.46□□□□□ -1.7
NPHP1O15259 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NPHP1O15259 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.46□□□□□ -1.7
NPHP1O15259 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.46□□□□□ -1.7
NPHP1O15259 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.46□□□□□ -1.7
NPHP1O15259 KLHL2P1-201ENST00000508691 521 ntBASIC4.46□□□□□ -1.7
NPHP1O15259 MTCO2P32-201ENST00000514865 403 ntBASIC4.46□□□□□ -1.7
NPHP1O15259 RNU6-150P-201ENST00000516237 95 ntBASIC4.46□□□□□ -1.7
NPHP1O15259 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NPHP1O15259 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
NPHP1O15259 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.46□□□□□ -1.7
NPHP1O15259 AC087465.1-201ENST00000560574 245 ntBASIC4.46□□□□□ -1.7
NPHP1O15259 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.46□□□□□ -1.7
NPHP1O15259 AC061975.8-201ENST00000587058 721 ntBASIC4.46□□□□□ -1.7
NPHP1O15259 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.46□□□□□ -1.7
NPHP1O15259 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.46□□□□□ -1.7
NPHP1O15259 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.46□□□□□ -1.7
NPHP1O15259 AC005858.4-201ENST00000623191 700 ntBASIC4.46□□□□□ -1.7
NPHP1O15259 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NPHP1O15259 HSPA8P1-201ENST00000425843 1833 ntBASIC4.46□□□□□ -1.7
NPHP1O15259 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.46□□□□□ -1.7
NPHP1O15259 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NPHP1O15259 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NPHP1O15259 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.45□□□□□ -1.7
NPHP1O15259 FAM133CP-201ENST00000332869 704 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 RNU6-28P-201ENST00000362378 107 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPHP1O15259 DEFB109C-201ENST00000382575 264 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 DEFB109B-201ENST00000382656 264 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 RNU6-157P-201ENST00000383957 107 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 SNORD17-201ENST00000390930 237 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 SNORA48.5-201ENST00000391143 135 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 RNA5SP129-201ENST00000410276 118 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 RNU6-757P-201ENST00000410334 100 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 AC006960.1-201ENST00000419980 153 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 AL137014.1-201ENST00000420490 1226 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.45□□□□□ -1.7
NPHP1O15259 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.45□□□□□ -1.7
NPHP1O15259 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.45□□□□□ -1.7
NPHP1O15259 AL512649.1-201ENST00000428997 581 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 USP9YP10-201ENST00000454868 628 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.45□□□□□ -1.7
NPHP1O15259 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.45□□□□□ -1.7
NPHP1O15259 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms