Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
LSM1O15116 AC073325.2-201ENST00000339545 159 ntBASIC2.95□□□□□ -1.94
LSM1O15116 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LSM1O15116 RNU6-1155P-201ENST00000363554 107 ntBASIC2.95□□□□□ -1.94
LSM1O15116 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
LSM1O15116 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.95□□□□□ -1.94
LSM1O15116 RNA5SP274-201ENST00000410484 108 ntBASIC2.95□□□□□ -1.94
LSM1O15116 AL136133.1-201ENST00000413694 376 ntBASIC2.95□□□□□ -1.94
LSM1O15116 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.95□□□□□ -1.94
LSM1O15116 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.95□□□□□ -1.94
LSM1O15116 UBE2D3P3-201ENST00000426992 425 ntBASIC2.95□□□□□ -1.94
LSM1O15116 EZH2P1-201ENST00000431167 291 ntBASIC2.95□□□□□ -1.94
LSM1O15116 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
LSM1O15116 Z95327.1-201ENST00000446082 482 ntBASIC2.95□□□□□ -1.94
LSM1O15116 AL359385.1-201ENST00000456509 365 ntBASIC2.95□□□□□ -1.94
LSM1O15116 AL031183.1-201ENST00000457667 207 ntBASIC2.95□□□□□ -1.94
LSM1O15116 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.95□□□□□ -1.94
LSM1O15116 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.95□□□□□ -1.94
LSM1O15116 MLLT10P2-201ENST00000506434 249 ntBASIC2.95□□□□□ -1.94
LSM1O15116 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
LSM1O15116 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LSM1O15116 RN7SKP157-201ENST00000516174 282 ntBASIC2.95□□□□□ -1.94
LSM1O15116 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.95□□□□□ -1.94
LSM1O15116 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.95□□□□□ -1.94
LSM1O15116 AP001317.1-201ENST00000531194 960 ntBASIC2.95□□□□□ -1.94
LSM1O15116 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LSM1O15116 AP005205.1-201ENST00000563503 508 ntBASIC2.95□□□□□ -1.94
LSM1O15116 AC023043.3-201ENST00000593113 385 ntBASIC2.95□□□□□ -1.94
LSM1O15116 AL109618.2-201ENST00000605527 211 ntBASIC2.95□□□□□ -1.94
LSM1O15116 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.95□□□□□ -1.94
LSM1O15116 SNHG22-203ENST00000617833 660 ntBASIC2.95□□□□□ -1.94
LSM1O15116 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.95□□□□□ -1.94
LSM1O15116 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.95□□□□□ -1.94
LSM1O15116 AC079228.1-201ENST00000624774 1049 ntBASIC2.95□□□□□ -1.94
LSM1O15116 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LSM1O15116 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LSM1O15116 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
LSM1O15116 U6.112-201ENST00000384129 70 ntBASIC2.94□□□□□ -1.94
LSM1O15116 SNORD67-201ENST00000390833 111 ntBASIC2.94□□□□□ -1.94
LSM1O15116 AC016769.3-201ENST00000396562 315 ntBASIC2.94□□□□□ -1.94
LSM1O15116 TAF9BP1-201ENST00000396646 746 ntBASIC2.94□□□□□ -1.94
LSM1O15116 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
LSM1O15116 TMSB4XP8-201ENST00000402089 135 ntBASIC2.94□□□□□ -1.94
LSM1O15116 TMSB4XP6-201ENST00000415187 135 ntBASIC2.94□□□□□ -1.94
LSM1O15116 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LSM1O15116 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.94□□□□□ -1.94
LSM1O15116 TMSB4XP1-201ENST00000424567 135 ntBASIC2.94□□□□□ -1.94
LSM1O15116 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.94□□□□□ -1.94
LSM1O15116 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.94□□□□□ -1.94
LSM1O15116 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.94□□□□□ -1.94
LSM1O15116 OR6K5P-201ENST00000447050 945 ntBASIC2.94□□□□□ -1.94
LSM1O15116 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.94□□□□□ -1.94
LSM1O15116 RN7SL863P-201ENST00000462370 296 ntBASIC2.94□□□□□ -1.94
LSM1O15116 FAM133DP-201ENST00000464802 691 ntBASIC2.94□□□□□ -1.94
LSM1O15116 RPL23AP11-201ENST00000475260 469 ntBASIC2.94□□□□□ -1.94
LSM1O15116 AC109925.1-201ENST00000478069 331 ntBASIC2.94□□□□□ -1.94
LSM1O15116 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.94□□□□□ -1.94
LSM1O15116 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
LSM1O15116 CBX3P3-201ENST00000508108 532 ntBASIC2.94□□□□□ -1.94
LSM1O15116 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.94□□□□□ -1.94
LSM1O15116 MTND5P4-201ENST00000514978 288 ntBASIC2.94□□□□□ -1.94
LSM1O15116 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.94□□□□□ -1.94
LSM1O15116 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.94□□□□□ -1.94
LSM1O15116 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.94□□□□□ -1.94
LSM1O15116 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.94□□□□□ -1.94
LSM1O15116 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.94□□□□□ -1.94
LSM1O15116 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.94□□□□□ -1.94
LSM1O15116 MIR3158-1-201ENST00000583596 81 ntBASIC2.94□□□□□ -1.94
LSM1O15116 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.94□□□□□ -1.94
LSM1O15116 AC098483.2-201ENST00000603158 454 ntBASIC2.94□□□□□ -1.94
LSM1O15116 AC008739.3-201ENST00000603262 127 ntBASIC2.94□□□□□ -1.94
LSM1O15116 AC106900.2-201ENST00000604994 317 ntBASIC2.94□□□□□ -1.94
LSM1O15116 AL138880.2-201ENST00000616214 239 ntBASIC2.94□□□□□ -1.94
LSM1O15116 MIR6076-201ENST00000617521 113 ntBASIC2.94□□□□□ -1.94
LSM1O15116 AC093875.1-201ENST00000623688 504 ntBASIC2.94□□□□□ -1.94
LSM1O15116 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.94□□□□□ -1.94
LSM1O15116 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LSM1O15116 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
LSM1O15116 CUL1P1-201ENST00000509510 2425 ntBASIC2.93□□□□□ -1.94
LSM1O15116 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LSM1O15116 RNU6-799P-201ENST00000363567 107 ntBASIC2.93□□□□□ -1.94
LSM1O15116 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
LSM1O15116 RNU6-207P-201ENST00000384137 107 ntBASIC2.93□□□□□ -1.94
LSM1O15116 SNORD15B-201ENST00000384714 146 ntBASIC2.93□□□□□ -1.94
LSM1O15116 RPL7P25-201ENST00000404151 721 ntBASIC2.93□□□□□ -1.94
LSM1O15116 FAT1P1-201ENST00000406588 507 ntBASIC2.93□□□□□ -1.94
LSM1O15116 MIR1289-1-201ENST00000408836 144 ntBASIC2.93□□□□□ -1.94
LSM1O15116 BX682237.1-201ENST00000415016 335 ntBASIC2.93□□□□□ -1.94
LSM1O15116 BOLA3P4-201ENST00000418151 400 ntBASIC2.93□□□□□ -1.94
LSM1O15116 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.93□□□□□ -1.94
LSM1O15116 AC005300.1-201ENST00000428401 373 ntBASIC2.93□□□□□ -1.94
LSM1O15116 FO393414.1-201ENST00000428697 1184 ntBASIC2.93□□□□□ -1.94
LSM1O15116 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.93□□□□□ -1.94
LSM1O15116 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.93□□□□□ -1.94
LSM1O15116 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.93□□□□□ -1.94
LSM1O15116 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
LSM1O15116 MOB1AP2-201ENST00000446060 614 ntBASIC2.93□□□□□ -1.94
LSM1O15116 AC016696.1-201ENST00000446949 318 ntBASIC2.93□□□□□ -1.94
LSM1O15116 MTCO1P48-201ENST00000448024 1096 ntBASIC2.93□□□□□ -1.94
LSM1O15116 AL590664.1-201ENST00000448065 339 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms