Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.26□□□□□ -1.89
CHD1O14646 HMGB1P41-201ENST00000520234 440 ntBASIC3.26□□□□□ -1.89
CHD1O14646 OR4R2P-201ENST00000530815 597 ntBASIC3.26□□□□□ -1.89
CHD1O14646 AC091488.1-201ENST00000604239 660 ntBASIC3.26□□□□□ -1.89
CHD1O14646 C2orf27A-204ENST00000623058 969 ntBASIC3.26□□□□□ -1.89
CHD1O14646 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHD1O14646 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CHD1O14646 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CHD1O14646 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.25□□□□□ -1.89
CHD1O14646 AC239798.3-201ENST00000454459 408 ntBASIC3.25□□□□□ -1.89
CHD1O14646 MTND5P27-201ENST00000428871 1720 ntBASIC3.25□□□□□ -1.89
CHD1O14646 RLIMP2-201ENST00000427891 1563 ntBASIC3.25□□□□□ -1.89
CHD1O14646 FAM35CP-201ENST00000554755 2470 ntBASIC3.25□□□□□ -1.89
CHD1O14646 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.25□□□□□ -1.89
CHD1O14646 RPL21P75-201ENST00000396599 483 ntBASIC3.24□□□□□ -1.89
CHD1O14646 RPL21P1-201ENST00000399532 476 ntBASIC3.24□□□□□ -1.89
CHD1O14646 RPL21P28-201ENST00000401418 483 ntBASIC3.24□□□□□ -1.89
CHD1O14646 AL592114.1-201ENST00000403842 483 ntBASIC3.24□□□□□ -1.89
CHD1O14646 NDUFB4P5-201ENST00000415445 361 ntBASIC3.24□□□□□ -1.89
CHD1O14646 AC009969.1-201ENST00000438726 172 ntBASIC3.24□□□□□ -1.89
CHD1O14646 RPL21P16-201ENST00000495531 483 ntBASIC3.24□□□□□ -1.89
CHD1O14646 RPS27P27-201ENST00000498779 255 ntBASIC3.24□□□□□ -1.89
CHD1O14646 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.24□□□□□ -1.89
CHD1O14646 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.24□□□□□ -1.89
CHD1O14646 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.24□□□□□ -1.89
CHD1O14646 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.24□□□□□ -1.89
CHD1O14646 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.24□□□□□ -1.89
CHD1O14646 AC012360.2-201ENST00000609349 391 ntBASIC3.24□□□□□ -1.89
CHD1O14646 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.24□□□□□ -1.89
CHD1O14646 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.24□□□□□ -1.89
CHD1O14646 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CHD1O14646 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.24□□□□□ -1.89
CHD1O14646 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.24□□□□□ -1.89
CHD1O14646 AP001148.1-201ENST00000624124 2359 ntBASIC3.24□□□□□ -1.89
CHD1O14646 AC093151.1-201ENST00000427711 313 ntBASIC3.24□□□□□ -1.89
CHD1O14646 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.24□□□□□ -1.89
CHD1O14646 USP9YP8-201ENST00000441913 500 ntBASIC3.24□□□□□ -1.89
CHD1O14646 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.24□□□□□ -1.89
CHD1O14646 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.24□□□□□ -1.89
CHD1O14646 RPL23AP44-201ENST00000482216 473 ntBASIC3.24□□□□□ -1.89
CHD1O14646 AC090543.1-201ENST00000492168 485 ntBASIC3.24□□□□□ -1.89
CHD1O14646 AC026412.2-201ENST00000512270 1075 ntBASIC3.24□□□□□ -1.89
CHD1O14646 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.24□□□□□ -1.89
CHD1O14646 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.24□□□□□ -1.89
CHD1O14646 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.24□□□□□ -1.89
CHD1O14646 BX248123.2-201ENST00000606318 124 ntBASIC3.24□□□□□ -1.89
CHD1O14646 Y_RNA.783-201ENST00000613546 102 ntBASIC3.24□□□□□ -1.89
CHD1O14646 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHD1O14646 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHD1O14646 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
CHD1O14646 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CHD1O14646 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHD1O14646 SNORA67.5-201ENST00000391036 107 ntBASIC3.23□□□□□ -1.89
CHD1O14646 DNAJC19P4-201ENST00000440115 345 ntBASIC3.23□□□□□ -1.89
CHD1O14646 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.23□□□□□ -1.89
CHD1O14646 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.23□□□□□ -1.89
CHD1O14646 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.23□□□□□ -1.89
CHD1O14646 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.23□□□□□ -1.89
CHD1O14646 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHD1O14646 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CHD1O14646 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.22□□□□□ -1.89
CHD1O14646 HMGB1P10-201ENST00000395823 563 ntBASIC3.22□□□□□ -1.89
CHD1O14646 SNORD88.1-201ENST00000408684 91 ntBASIC3.22□□□□□ -1.89
CHD1O14646 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.22□□□□□ -1.89
CHD1O14646 AC092798.1-201ENST00000458542 409 ntBASIC3.22□□□□□ -1.89
CHD1O14646 RPL5P13-201ENST00000462840 709 ntBASIC3.22□□□□□ -1.89
CHD1O14646 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.22□□□□□ -1.89
CHD1O14646 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CHD1O14646 AC117532.1-201ENST00000514638 323 ntBASIC3.22□□□□□ -1.89
CHD1O14646 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.22□□□□□ -1.89
CHD1O14646 IGHV3-76-201ENST00000522465 295 ntBASIC3.22□□□□□ -1.89
CHD1O14646 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.22□□□□□ -1.89
CHD1O14646 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.22□□□□□ -1.89
CHD1O14646 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.22□□□□□ -1.89
CHD1O14646 LRRC37A5P-203ENST00000580181 585 ntBASIC3.22□□□□□ -1.89
CHD1O14646 WISP1-OT1-201ENST00000602893 642 ntBASIC3.22□□□□□ -1.89
CHD1O14646 AC068790.3-201ENST00000602988 553 ntBASIC3.22□□□□□ -1.89
CHD1O14646 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHD1O14646 AC093909.5-201ENST00000621839 1799 ntBASIC3.22□□□□□ -1.89
CHD1O14646 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHD1O14646 RNU2-17P-201ENST00000410290 190 ntBASIC3.22□□□□□ -1.89
CHD1O14646 AL353597.2-202ENST00000434901 373 ntBASIC3.22□□□□□ -1.89
CHD1O14646 RN7SL283P-201ENST00000489055 303 ntBASIC3.22□□□□□ -1.89
CHD1O14646 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHD1O14646 OR4P1P-201ENST00000530808 1136 ntBASIC3.22□□□□□ -1.89
CHD1O14646 AC069234.5-201ENST00000611056 416 ntBASIC3.22□□□□□ -1.89
CHD1O14646 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.21□□□□□ -1.89
CHD1O14646 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.21□□□□□ -1.9
CHD1O14646 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.21□□□□□ -1.9
CHD1O14646 AC106901.1-201ENST00000425086 698 ntBASIC3.21□□□□□ -1.9
CHD1O14646 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.21□□□□□ -1.9
CHD1O14646 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.21□□□□□ -1.9
CHD1O14646 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.21□□□□□ -1.9
CHD1O14646 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.21□□□□□ -1.9
CHD1O14646 AL451074.3-201ENST00000437709 472 ntBASIC3.21□□□□□ -1.9
CHD1O14646 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.21□□□□□ -1.9
CHD1O14646 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.21□□□□□ -1.9
CHD1O14646 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.21□□□□□ -1.9
CHD1O14646 SEPT7P7-201ENST00000420492 1301 ntBASIC3.21□□□□□ -1.9
CHD1O14646 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms