Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC069234.5-201ENST00000611056 416 ntBASIC4.2□□□□□ -1.74
CUX2O14529 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.2□□□□□ -1.74
CUX2O14529 AC091948.2-201ENST00000636510 279 ntBASIC4.2□□□□□ -1.74
CUX2O14529 AL163152.1-201ENST00000642001 374 ntBASIC4.2□□□□□ -1.74
CUX2O14529 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CUX2O14529 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.2□□□□□ -1.74
CUX2O14529 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CUX2O14529 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC4.2□□□□□ -1.74
CUX2O14529 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.2□□□□□ -1.74
CUX2O14529 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CUX2O14529 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC4.19□□□□□ -1.74
CUX2O14529 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CUX2O14529 AL139276.1-201ENST00000311910 1001 ntBASIC4.19□□□□□ -1.74
CUX2O14529 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CUX2O14529 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CUX2O14529 HMGB1P10-201ENST00000395823 563 ntBASIC4.19□□□□□ -1.74
CUX2O14529 RPL31P52-201ENST00000407532 367 ntBASIC4.19□□□□□ -1.74
CUX2O14529 UBE2V1P15-201ENST00000407776 448 ntBASIC4.19□□□□□ -1.74
CUX2O14529 AC080125.1-201ENST00000414888 684 ntBASIC4.19□□□□□ -1.74
CUX2O14529 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CUX2O14529 MTND2P6-201ENST00000455337 1030 ntBASIC4.19□□□□□ -1.74
CUX2O14529 HMGB1P25-201ENST00000468402 607 ntBASIC4.19□□□□□ -1.74
CUX2O14529 RPL36AP51-201ENST00000487216 318 ntBASIC4.19□□□□□ -1.74
CUX2O14529 AC092045.1-201ENST00000495716 1231 ntBASIC4.19□□□□□ -1.74
CUX2O14529 POU5F1P7-201ENST00000508759 541 ntBASIC4.19□□□□□ -1.74
CUX2O14529 AP003385.6-201ENST00000531603 374 ntBASIC4.19□□□□□ -1.74
CUX2O14529 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.19□□□□□ -1.74
CUX2O14529 AL389895.1-201ENST00000554127 252 ntBASIC4.19□□□□□ -1.74
CUX2O14529 VN1R80P-201ENST00000597126 338 ntBASIC4.19□□□□□ -1.74
CUX2O14529 AC138915.3-201ENST00000562908 1389 ntBASIC4.19□□□□□ -1.74
CUX2O14529 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.19□□□□□ -1.74
CUX2O14529 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CUX2O14529 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CUX2O14529 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CUX2O14529 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CUX2O14529 RNU1-91P-201ENST00000364746 163 ntBASIC4.18□□□□□ -1.74
CUX2O14529 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.18□□□□□ -1.74
CUX2O14529 AC011816.1-201ENST00000441346 546 ntBASIC4.18□□□□□ -1.74
CUX2O14529 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.18□□□□□ -1.74
CUX2O14529 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.18□□□□□ -1.74
CUX2O14529 AL500527.1-201ENST00000448532 255 ntBASIC4.18□□□□□ -1.74
CUX2O14529 AC010683.1-201ENST00000473673 378 ntBASIC4.18□□□□□ -1.74
CUX2O14529 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC4.18□□□□□ -1.74
CUX2O14529 RPL23AP49-201ENST00000492925 468 ntBASIC4.18□□□□□ -1.74
CUX2O14529 AC023050.1-201ENST00000498198 304 ntBASIC4.18□□□□□ -1.74
CUX2O14529 SNORA31.13-201ENST00000516624 135 ntBASIC4.18□□□□□ -1.74
CUX2O14529 AC022790.1-201ENST00000522872 204 ntBASIC4.18□□□□□ -1.74
CUX2O14529 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.18□□□□□ -1.74
CUX2O14529 AC135628.1-201ENST00000568867 534 ntBASIC4.18□□□□□ -1.74
CUX2O14529 MTND4LP24-201ENST00000572277 291 ntBASIC4.18□□□□□ -1.74
CUX2O14529 MIR4716-201ENST00000579628 84 ntBASIC4.18□□□□□ -1.74
CUX2O14529 AC004775.1-201ENST00000607389 753 ntBASIC4.18□□□□□ -1.74
CUX2O14529 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.18□□□□□ -1.74
CUX2O14529 AP006248.2-201ENST00000623309 592 ntBASIC4.18□□□□□ -1.74
CUX2O14529 CFTRP2-201ENST00000634304 199 ntBASIC4.18□□□□□ -1.74
CUX2O14529 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CUX2O14529 AL021368.2-201ENST00000606125 5352 ntBASIC4.18□□□□□ -1.74
CUX2O14529 ZNF542P-204ENST00000482727 1305 ntBASIC4.18□□□□□ -1.74
CUX2O14529 USP9YP6-201ENST00000413550 854 ntBASIC4.18□□□□□ -1.74
CUX2O14529 TPTE2P6-202ENST00000445572 1007 ntBASIC4.18□□□□□ -1.74
CUX2O14529 USP9YP34-201ENST00000453983 808 ntBASIC4.18□□□□□ -1.74
CUX2O14529 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.18□□□□□ -1.74
CUX2O14529 AP000893.1-201ENST00000474462 794 ntBASIC4.18□□□□□ -1.74
CUX2O14529 FAM92A1P2-202ENST00000504766 877 ntBASIC4.18□□□□□ -1.74
CUX2O14529 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.18□□□□□ -1.74
CUX2O14529 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.18□□□□□ -1.74
CUX2O14529 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.18□□□□□ -1.74
CUX2O14529 AP001207.1-201ENST00000524051 481 ntBASIC4.18□□□□□ -1.74
CUX2O14529 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CUX2O14529 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.18□□□□□ -1.74
CUX2O14529 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CUX2O14529 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.18□□□□□ -1.74
CUX2O14529 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.18□□□□□ -1.74
CUX2O14529 U6.48-201ENST00000618523 106 ntBASIC4.18□□□□□ -1.74
CUX2O14529 AC000123.2-201ENST00000623124 461 ntBASIC4.18□□□□□ -1.74
CUX2O14529 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CUX2O14529 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CUX2O14529 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.17□□□□□ -1.74
CUX2O14529 MTND5P29-201ENST00000458676 1807 ntBASIC4.17□□□□□ -1.74
CUX2O14529 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CUX2O14529 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CUX2O14529 Y_RNA.224-201ENST00000364308 111 ntBASIC4.17□□□□□ -1.74
CUX2O14529 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.17□□□□□ -1.74
CUX2O14529 RNY1P14-201ENST00000384426 108 ntBASIC4.17□□□□□ -1.74
CUX2O14529 AC234782.4-201ENST00000417646 1048 ntBASIC4.17□□□□□ -1.74
CUX2O14529 ARL2BPP3-201ENST00000421226 480 ntBASIC4.17□□□□□ -1.74
CUX2O14529 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.17□□□□□ -1.74
CUX2O14529 AC244505.4-201ENST00000434905 287 ntBASIC4.17□□□□□ -1.74
CUX2O14529 ELOCP11-201ENST00000436690 332 ntBASIC4.17□□□□□ -1.74
CUX2O14529 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CUX2O14529 SSXP5-201ENST00000443473 287 ntBASIC4.17□□□□□ -1.74
CUX2O14529 ELOCP16-201ENST00000444494 332 ntBASIC4.17□□□□□ -1.74
CUX2O14529 AL590399.6-201ENST00000446396 307 ntBASIC4.17□□□□□ -1.74
CUX2O14529 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.17□□□□□ -1.74
CUX2O14529 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.17□□□□□ -1.74
CUX2O14529 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.17□□□□□ -1.74
CUX2O14529 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.17□□□□□ -1.74
CUX2O14529 SNORA4-201ENST00000584302 138 ntBASIC4.17□□□□□ -1.74
CUX2O14529 AC020895.1-201ENST00000595362 272 ntBASIC4.17□□□□□ -1.74
CUX2O14529 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms