Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SOX1O00570 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SOX1O00570 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SOX1O00570 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
SOX1O00570 SNORA71.3-201ENST00000362582 128 ntBASIC5.44□□□□□ -1.54
SOX1O00570 RNU6-1287P-201ENST00000362914 107 ntBASIC5.44□□□□□ -1.54
SOX1O00570 RNA5SP391-201ENST00000363456 119 ntBASIC5.44□□□□□ -1.54
SOX1O00570 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SOX1O00570 RNU6-1060P-201ENST00000384664 107 ntBASIC5.44□□□□□ -1.54
SOX1O00570 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SOX1O00570 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.44□□□□□ -1.54
SOX1O00570 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.44□□□□□ -1.54
SOX1O00570 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.44□□□□□ -1.54
SOX1O00570 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.44□□□□□ -1.54
SOX1O00570 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.44□□□□□ -1.54
SOX1O00570 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.44□□□□□ -1.54
SOX1O00570 EZH2P1-201ENST00000431167 291 ntBASIC5.44□□□□□ -1.54
SOX1O00570 RPL21P23-201ENST00000446654 460 ntBASIC5.44□□□□□ -1.54
SOX1O00570 AL353691.1-201ENST00000451332 387 ntBASIC5.44□□□□□ -1.54
SOX1O00570 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.44□□□□□ -1.54
SOX1O00570 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.44□□□□□ -1.54
SOX1O00570 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.44□□□□□ -1.54
SOX1O00570 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.44□□□□□ -1.54
SOX1O00570 AC097473.1-201ENST00000508142 408 ntBASIC5.44□□□□□ -1.54
SOX1O00570 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.44□□□□□ -1.54
SOX1O00570 TOMM22P4-201ENST00000511318 336 ntBASIC5.44□□□□□ -1.54
SOX1O00570 AC007016.1-201ENST00000512110 244 ntBASIC5.44□□□□□ -1.54
SOX1O00570 MIR2116-201ENST00000517221 80 ntBASIC5.44□□□□□ -1.54
SOX1O00570 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SOX1O00570 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.44□□□□□ -1.54
SOX1O00570 AC024619.4-201ENST00000580924 316 ntBASIC5.44□□□□□ -1.54
SOX1O00570 AC073539.2-201ENST00000597113 165 ntBASIC5.44□□□□□ -1.54
SOX1O00570 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.44□□□□□ -1.54
SOX1O00570 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.44□□□□□ -1.54
SOX1O00570 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SOX1O00570 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SOX1O00570 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SOX1O00570 AP002512.4-202ENST00000641599 4530 ntBASIC5.44□□□□□ -1.54
SOX1O00570 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SOX1O00570 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SOX1O00570 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.44□□□□□ -1.54
SOX1O00570 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SOX1O00570 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.43□□□□□ -1.54
SOX1O00570 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SOX1O00570 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX1O00570 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SOX1O00570 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SOX1O00570 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SOX1O00570 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX1O00570 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX1O00570 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX1O00570 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SOX1O00570 AL121886.1-201ENST00000358609 435 ntBASIC5.43□□□□□ -1.54
SOX1O00570 Y_RNA.252-201ENST00000364556 101 ntBASIC5.43□□□□□ -1.54
SOX1O00570 SNORA62.3-201ENST00000365110 153 ntBASIC5.43□□□□□ -1.54
SOX1O00570 Y_RNA.364-201ENST00000365532 101 ntBASIC5.43□□□□□ -1.54
SOX1O00570 RNU5E-6P-201ENST00000365574 115 ntBASIC5.43□□□□□ -1.54
SOX1O00570 SNORA75B-201ENST00000384053 137 ntBASIC5.43□□□□□ -1.54
SOX1O00570 Y_RNA.527-201ENST00000384573 102 ntBASIC5.43□□□□□ -1.54
SOX1O00570 RNU2-15P-201ENST00000410692 191 ntBASIC5.43□□□□□ -1.54
SOX1O00570 RNU4-46P-201ENST00000410818 138 ntBASIC5.43□□□□□ -1.54
SOX1O00570 AC114491.1-201ENST00000416095 246 ntBASIC5.43□□□□□ -1.54
SOX1O00570 RAC1P6-201ENST00000423911 575 ntBASIC5.43□□□□□ -1.54
SOX1O00570 RPL7P46-201ENST00000425129 740 ntBASIC5.43□□□□□ -1.54
SOX1O00570 AC096644.2-201ENST00000429278 159 ntBASIC5.43□□□□□ -1.54
SOX1O00570 SNAP23P1-201ENST00000433229 246 ntBASIC5.43□□□□□ -1.54
SOX1O00570 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.43□□□□□ -1.54
SOX1O00570 PHBP16-201ENST00000446318 950 ntBASIC5.43□□□□□ -1.54
SOX1O00570 IGHV5-78-201ENST00000450948 295 ntBASIC5.43□□□□□ -1.54
SOX1O00570 AL354710.1-201ENST00000453641 246 ntBASIC5.43□□□□□ -1.54
SOX1O00570 HMGB1P30-201ENST00000492455 606 ntBASIC5.43□□□□□ -1.54
SOX1O00570 AC010350.1-201ENST00000504908 231 ntBASIC5.43□□□□□ -1.54
SOX1O00570 COX7A2P2-201ENST00000505291 250 ntBASIC5.43□□□□□ -1.54
SOX1O00570 AC026726.1-201ENST00000512859 601 ntBASIC5.43□□□□□ -1.54
SOX1O00570 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.43□□□□□ -1.54
SOX1O00570 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.43□□□□□ -1.54
SOX1O00570 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.43□□□□□ -1.54
SOX1O00570 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.43□□□□□ -1.54
SOX1O00570 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.43□□□□□ -1.54
SOX1O00570 AC135001.1-201ENST00000544546 283 ntBASIC5.43□□□□□ -1.54
SOX1O00570 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.43□□□□□ -1.54
SOX1O00570 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.43□□□□□ -1.54
SOX1O00570 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.43□□□□□ -1.54
SOX1O00570 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.43□□□□□ -1.54
SOX1O00570 NUTF2P8-201ENST00000604593 363 ntBASIC5.43□□□□□ -1.54
SOX1O00570 ARF4P1-201ENST00000605447 541 ntBASIC5.43□□□□□ -1.54
SOX1O00570 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.43□□□□□ -1.54
SOX1O00570 AC103705.1-201ENST00000619013 241 ntBASIC5.43□□□□□ -1.54
SOX1O00570 PLCE1P1-201ENST00000622094 305 ntBASIC5.43□□□□□ -1.54
SOX1O00570 AL669831.3-213ENST00000636676 183 ntBASIC5.43□□□□□ -1.54
SOX1O00570 SMG1P7-201ENST00000565246 2704 ntBASIC5.43□□□□□ -1.54
SOX1O00570 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX1O00570 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX1O00570 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SOX1O00570 AC011978.2-201ENST00000569835 2054 ntBASIC5.43□□□□□ -1.54
SOX1O00570 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX1O00570 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SOX1O00570 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.42□□□□□ -1.54
SOX1O00570 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX1O00570 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms