Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.08□□□□□ -2.08
SDCBPO00560 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.08□□□□□ -2.08
SDCBPO00560 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SDCBPO00560 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.08□□□□□ -2.08
SDCBPO00560 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.08□□□□□ -2.08
SDCBPO00560 SNORA31.1-201ENST00000515993 133 ntBASIC2.08□□□□□ -2.08
SDCBPO00560 SNORA31.5-201ENST00000516190 133 ntBASIC2.08□□□□□ -2.08
SDCBPO00560 OSBPL9P3-201ENST00000534523 595 ntBASIC2.08□□□□□ -2.08
SDCBPO00560 SERPINE4P-201ENST00000554978 281 ntBASIC2.08□□□□□ -2.08
SDCBPO00560 CKS1BP1-201ENST00000555221 240 ntBASIC2.08□□□□□ -2.08
SDCBPO00560 AC074050.1-201ENST00000563247 211 ntBASIC2.08□□□□□ -2.08
SDCBPO00560 RPL12P50-201ENST00000603116 116 ntBASIC2.08□□□□□ -2.08
SDCBPO00560 AC135178.6-201ENST00000605314 398 ntBASIC2.08□□□□□ -2.08
SDCBPO00560 AC245100.7-201ENST00000609678 442 ntBASIC2.08□□□□□ -2.08
SDCBPO00560 AC006249.1-201ENST00000621223 471 ntBASIC2.08□□□□□ -2.08
SDCBPO00560 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
SDCBPO00560 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SDCBPO00560 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SDCBPO00560 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SDCBPO00560 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SDCBPO00560 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.07□□□□□ -2.08
SDCBPO00560 MIR21-201ENST00000362134 72 ntBASIC2.07□□□□□ -2.08
SDCBPO00560 SNORA27.3-201ENST00000364937 134 ntBASIC2.07□□□□□ -2.08
SDCBPO00560 Y_RNA.493-201ENST00000384422 102 ntBASIC2.07□□□□□ -2.08
SDCBPO00560 RNU6-837P-201ENST00000391056 108 ntBASIC2.07□□□□□ -2.08
SDCBPO00560 MIR1289-1-201ENST00000408836 144 ntBASIC2.07□□□□□ -2.08
SDCBPO00560 RNA5SP56-201ENST00000410277 118 ntBASIC2.07□□□□□ -2.08
SDCBPO00560 RNA5SP38-201ENST00000410750 119 ntBASIC2.07□□□□□ -2.08
SDCBPO00560 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.07□□□□□ -2.08
SDCBPO00560 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.07□□□□□ -2.08
SDCBPO00560 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.07□□□□□ -2.08
SDCBPO00560 HSFY1P1-201ENST00000423928 1178 ntBASIC2.07□□□□□ -2.08
SDCBPO00560 MTCO1P57-201ENST00000432182 261 ntBASIC2.07□□□□□ -2.08
SDCBPO00560 MTND2P21-201ENST00000436242 1042 ntBASIC2.07□□□□□ -2.08
SDCBPO00560 AC004865.1-201ENST00000442276 1003 ntBASIC2.07□□□□□ -2.08
SDCBPO00560 XKRY2-201ENST00000442362 1093 ntBASIC2.07□□□□□ -2.08
SDCBPO00560 RAB11AP1-201ENST00000442978 646 ntBASIC2.07□□□□□ -2.08
SDCBPO00560 AL513328.1-201ENST00000446460 224 ntBASIC2.07□□□□□ -2.08
SDCBPO00560 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.07□□□□□ -2.08
SDCBPO00560 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.07□□□□□ -2.08
SDCBPO00560 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.07□□□□□ -2.08
SDCBPO00560 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.07□□□□□ -2.08
SDCBPO00560 AC091917.2-201ENST00000505002 744 ntBASIC2.07□□□□□ -2.08
SDCBPO00560 VN1R104P-201ENST00000505115 1009 ntBASIC2.07□□□□□ -2.08
SDCBPO00560 SEM1P1-201ENST00000506694 209 ntBASIC2.07□□□□□ -2.08
SDCBPO00560 AC008885.2-201ENST00000509506 930 ntBASIC2.07□□□□□ -2.08
SDCBPO00560 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.07□□□□□ -2.08
SDCBPO00560 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.07□□□□□ -2.08
SDCBPO00560 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.07□□□□□ -2.08
SDCBPO00560 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.07□□□□□ -2.08
SDCBPO00560 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.07□□□□□ -2.08
SDCBPO00560 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.07□□□□□ -2.08
SDCBPO00560 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.07□□□□□ -2.08
SDCBPO00560 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.07□□□□□ -2.08
SDCBPO00560 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.07□□□□□ -2.08
SDCBPO00560 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.07□□□□□ -2.08
SDCBPO00560 VIS1.1-201ENST00000610517 203 ntBASIC2.07□□□□□ -2.08
SDCBPO00560 AC009032.1-201ENST00000617574 431 ntBASIC2.07□□□□□ -2.08
SDCBPO00560 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SDCBPO00560 AC018755.4-201ENST00000619715 454 ntBASIC2.07□□□□□ -2.08
SDCBPO00560 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.07□□□□□ -2.08
SDCBPO00560 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.07□□□□□ -2.08
SDCBPO00560 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.07□□□□□ -2.08
SDCBPO00560 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.07□□□□□ -2.08
SDCBPO00560 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SDCBPO00560 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.07□□□□□ -2.08
SDCBPO00560 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SDCBPO00560 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
SDCBPO00560 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.06□□□□□ -2.08
SDCBPO00560 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SDCBPO00560 RNA5SP456-201ENST00000364002 114 ntBASIC2.06□□□□□ -2.08
SDCBPO00560 MT-TC-201ENST00000387405 66 ntBASIC2.06□□□□□ -2.08
SDCBPO00560 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.06□□□□□ -2.08
SDCBPO00560 SFR1P1-201ENST00000403720 688 ntBASIC2.06□□□□□ -2.08
SDCBPO00560 FAT1P1-201ENST00000406588 507 ntBASIC2.06□□□□□ -2.08
SDCBPO00560 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.06□□□□□ -2.08
SDCBPO00560 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.06□□□□□ -2.08
SDCBPO00560 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.06□□□□□ -2.08
SDCBPO00560 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.06□□□□□ -2.08
SDCBPO00560 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.06□□□□□ -2.08
SDCBPO00560 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.06□□□□□ -2.08
SDCBPO00560 OFD1P18Y-201ENST00000420889 959 ntBASIC2.06□□□□□ -2.08
SDCBPO00560 AL831737.1-201ENST00000441288 271 ntBASIC2.06□□□□□ -2.08
SDCBPO00560 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SDCBPO00560 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.06□□□□□ -2.08
SDCBPO00560 AC233982.1-201ENST00000451247 436 ntBASIC2.06□□□□□ -2.08
SDCBPO00560 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.06□□□□□ -2.08
SDCBPO00560 RPL23AP45-201ENST00000476406 468 ntBASIC2.06□□□□□ -2.08
SDCBPO00560 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.06□□□□□ -2.08
SDCBPO00560 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.06□□□□□ -2.08
SDCBPO00560 AC108157.1-201ENST00000510511 539 ntBASIC2.06□□□□□ -2.08
SDCBPO00560 MTCO3P44-201ENST00000510977 541 ntBASIC2.06□□□□□ -2.08
SDCBPO00560 AC105914.1-201ENST00000511798 226 ntBASIC2.06□□□□□ -2.08
SDCBPO00560 AC112673.1-201ENST00000513168 575 ntBASIC2.06□□□□□ -2.08
SDCBPO00560 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.06□□□□□ -2.08
SDCBPO00560 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.06□□□□□ -2.08
SDCBPO00560 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.06□□□□□ -2.08
SDCBPO00560 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.06□□□□□ -2.08
SDCBPO00560 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.06□□□□□ -2.08
SDCBPO00560 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms