Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 MTCYBP14-201ENST00000457471 715 ntBASIC1.85□□□□□ -2.11
HMGN4O00479 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC1.85□□□□□ -2.11
HMGN4O00479 AIG1P1-201ENST00000503376 148 ntBASIC1.85□□□□□ -2.11
HMGN4O00479 AC069306.1-201ENST00000507006 843 ntBASIC1.85□□□□□ -2.11
HMGN4O00479 FABP5P6-201ENST00000510588 409 ntBASIC1.85□□□□□ -2.11
HMGN4O00479 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.85□□□□□ -2.11
HMGN4O00479 AC125611.2-201ENST00000551907 647 ntBASIC1.85□□□□□ -2.11
HMGN4O00479 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMGN4O00479 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.85□□□□□ -2.11
HMGN4O00479 AC090616.5-202ENST00000582111 297 ntBASIC1.85□□□□□ -2.11
HMGN4O00479 SNORD84-203ENST00000584275 78 ntBASIC1.85□□□□□ -2.11
HMGN4O00479 SNRPGP15-201ENST00000600149 222 ntBASIC1.85□□□□□ -2.11
HMGN4O00479 AP001521.1-201ENST00000609150 300 ntBASIC1.85□□□□□ -2.11
HMGN4O00479 MIR219B-201ENST00000637023 88 ntBASIC1.85□□□□□ -2.11
HMGN4O00479 AL136520.1-201ENST00000600311 1322 ntBASIC1.85□□□□□ -2.11
HMGN4O00479 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.85□□□□□ -2.11
HMGN4O00479 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
HMGN4O00479 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMGN4O00479 HSPE1P11-201ENST00000339579 310 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 MIR320B1-201ENST00000390209 79 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 RNU2-2P-201ENST00000410396 191 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 RNA5SP80-201ENST00000410475 111 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 AC109780.2-201ENST00000413467 845 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 MTND4P11-201ENST00000417020 1058 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.84□□□□□ -2.11
HMGN4O00479 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.84□□□□□ -2.11
HMGN4O00479 AL445646.1-201ENST00000431784 216 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.84□□□□□ -2.11
HMGN4O00479 AC096638.1-201ENST00000444678 216 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 AC104472.2-201ENST00000469035 601 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.84□□□□□ -2.11
HMGN4O00479 AC110792.2-201ENST00000510278 224 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 AC008413.1-201ENST00000511864 177 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.84□□□□□ -2.11
HMGN4O00479 MTCYBP41-201ENST00000528913 1123 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 AP002770.2-201ENST00000543613 532 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC1.84□□□□□ -2.11
HMGN4O00479 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.84□□□□□ -2.11
HMGN4O00479 HMGN2P28-201ENST00000606102 262 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 U2.15-201ENST00000611544 191 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 U2.16-201ENST00000613119 191 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
HMGN4O00479 U2.12-201ENST00000613778 191 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 U2.20-201ENST00000613956 192 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 U2.9-201ENST00000615427 191 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 U2.11-201ENST00000616345 191 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 U2.2-201ENST00000616535 191 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 U2.3-201ENST00000617785 191 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 U2.19-201ENST00000618602 191 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 RNU2-1-201ENST00000618664 191 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 U2.6-201ENST00000619225 191 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 U2.5-201ENST00000619465 191 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 U2.10-201ENST00000620268 191 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 MIR6852-201ENST00000621699 66 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 YWHAEP7-203ENST00000622054 312 ntBASIC1.84□□□□□ -2.11
HMGN4O00479 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC1.83□□□□□ -2.12
HMGN4O00479 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HMGN4O00479 EIF4EBP2P3-201ENST00000403144 334 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 SNORA3.2-201ENST00000408221 125 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 RNU6-1077P-201ENST00000410506 102 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 RN7SKP223-201ENST00000410582 62 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 RPL17P12-201ENST00000413391 526 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.83□□□□□ -2.12
HMGN4O00479 RPS6P14-201ENST00000425165 719 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 Z93242.1-201ENST00000427102 353 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.83□□□□□ -2.12
HMGN4O00479 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HMGN4O00479 RPL7P36-201ENST00000444633 681 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 UBBP3-201ENST00000445497 241 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 Z96811.1-201ENST00000445880 108 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.83□□□□□ -2.12
HMGN4O00479 MTAPP1-201ENST00000489154 819 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 AC079804.2-201ENST00000490376 200 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 RPL21P131-201ENST00000497298 483 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 AC098799.1-201ENST00000504752 800 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.83□□□□□ -2.12
HMGN4O00479 MTCO2P32-201ENST00000514865 403 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 AC074029.1-201ENST00000552531 1044 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.83□□□□□ -2.12
HMGN4O00479 AC234775.3-201ENST00000564612 656 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 AC022884.3-201ENST00000579571 248 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 MIR3935-201ENST00000583472 104 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 AC113368.1-201ENST00000603736 382 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 SNRPGP19-201ENST00000603826 189 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 AC068831.7-201ENST00000616954 363 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 AL590808.1-201ENST00000618696 141 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 AC006249.1-201ENST00000621223 471 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 DUXAP9-208ENST00000622815 614 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.83□□□□□ -2.12
HMGN4O00479 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.83□□□□□ -2.12
HMGN4O00479 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HMGN4O00479 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMGN4O00479 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.82□□□□□ -2.12
HMGN4O00479 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HMGN4O00479 AC233263.6-201ENST00000631132 1963 ntBASIC1.82□□□□□ -2.12
HMGN4O00479 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMGN4O00479 RNA5SP393-201ENST00000363423 117 ntBASIC1.82□□□□□ -2.12
HMGN4O00479 MIR634-201ENST00000385208 97 ntBASIC1.82□□□□□ -2.12
HMGN4O00479 RNA5SP425-201ENST00000410336 112 ntBASIC1.82□□□□□ -2.12
HMGN4O00479 AC105402.1-201ENST00000413336 545 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms