Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
MBD3L4A6NDZ8 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 AC138915.3-201ENST00000562908 1389 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 HSPE1P11-201ENST00000339579 310 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 RNU6-511P-201ENST00000363496 107 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 RNU6-1090P-201ENST00000364065 94 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 RNU6-173P-201ENST00000364215 104 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 Y_RNA.256-201ENST00000364594 104 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 SNORA23-201ENST00000365128 182 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 Y_RNA.402-201ENST00000383972 102 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 Y_RNA.453-201ENST00000384223 109 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 MIR1-2-201ENST00000384961 85 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 HSPD1P16-201ENST00000402302 394 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 RNU2-36P-201ENST00000410361 191 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 AL138799.3-201ENST00000438968 350 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 MTCO2P3-201ENST00000442543 421 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 MTCO3P45-201ENST00000443036 613 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 RPL23AP20-201ENST00000447965 421 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 RAD23BP3-201ENST00000454157 1152 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 AC027673.1-201ENST00000456245 405 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 AC022364.2-201ENST00000457963 554 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 RPL21P126-201ENST00000470049 478 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 RPL23AP2-201ENST00000471227 466 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 AC020890.1-201ENST00000491837 504 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 AC026402.1-201ENST00000513642 170 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 Y_RNA.693-201ENST00000516641 110 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 RNU6-840P-201ENST00000517275 65 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 AP003072.2-201ENST00000527756 676 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 MIR3160-1-201ENST00000577972 85 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 MIR4293-201ENST00000584305 78 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 AC006504.3-201ENST00000586818 523 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 AC010928.3-201ENST00000587712 541 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 AC025449.1-201ENST00000603896 529 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 AC017083.3-201ENST00000609955 700 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 AL023881.1-201ENST00000621088 301 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 MAPK10-349ENST00000641767 3661 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 AC093536.2-201ENST00000565257 1406 ntBASIC4.04□□□□□ -1.76
MBD3L4A6NDZ8 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 AC083843.3-201ENST00000623679 2186 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 SALL4P2-201ENST00000423288 2910 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 MAPK10-286ENST00000641208 8747 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 RNU6-641P-201ENST00000384006 107 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 AC068050.1-201ENST00000394891 380 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 MIR1277-201ENST00000408536 78 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 AL353193.1-201ENST00000421444 268 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 AC011998.1-201ENST00000433403 117 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 FGF7P6-202ENST00000451282 293 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 RPL7AP28-201ENST00000464513 571 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 AC109327.1-201ENST00000471666 403 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 MTAPP1-201ENST00000489154 819 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 RN7SL810P-201ENST00000493031 276 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 VN1R104P-201ENST00000505115 1009 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 AC004062.1-201ENST00000509926 645 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 RNU6-390P-201ENST00000516259 103 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 RNU6-1178P-201ENST00000516674 107 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 HMGB1P41-201ENST00000520234 440 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms