Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 AC109329.2-201ENST00000519658 482 ntBASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 AC245517.5-201ENST00000611529 162 ntBASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 VN1R74P-201ENST00000613259 503 ntBASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 AL442067.2-201ENST00000614033 363 ntBASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 MIR7973-1-201ENST00000614683 76 ntBASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 MIR6864-201ENST00000617935 70 ntBASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 AL359693.1-201ENST00000614959 2407 ntBASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 RNU6-317P-201ENST00000384031 107 ntBASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 RNU6-629P-201ENST00000384061 103 ntBASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 MIR196B-201ENST00000384852 84 ntBASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 HNRNPDP2-201ENST00000406475 478 ntBASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 OR51AB1P-201ENST00000429046 620 ntBASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 RPS7P2-201ENST00000435134 607 ntBASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 AC108938.1-201ENST00000451204 136 ntBASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 AL035407.2-201ENST00000454090 378 ntBASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 AL031183.1-201ENST00000457667 207 ntBASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 RAC1P5-201ENST00000512182 576 ntBASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 MTND2P26-201ENST00000528255 1029 ntBASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 MIR4319-201ENST00000577285 85 ntBASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 MIR4429-201ENST00000580105 73 ntBASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 NF1P10-201ENST00000613227 742 ntBASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 AL450472.3-201ENST00000615578 367 ntBASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.94□□□□□ -2.1
TCRBV3S1A0A5B6 Z82209.1-201ENST00000422141 2135 ntBASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 RNA5SP139-201ENST00000364340 117 ntBASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 AL606495.1-201ENST00000422100 813 ntBASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 NUP35P1-201ENST00000422734 947 ntBASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 UBE2V1P6-201ENST00000430840 422 ntBASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 AL358232.1-201ENST00000448030 501 ntBASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 AC104978.1-201ENST00000449387 391 ntBASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 NPM1P13-201ENST00000452663 865 ntBASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 AC090515.1-201ENST00000465295 476 ntBASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 RBM43P1-201ENST00000476891 1081 ntBASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 RN7SL274P-201ENST00000492268 272 ntBASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 FABP5P6-201ENST00000510588 409 ntBASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 RNA5SP471-201ENST00000516971 106 ntBASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 AHI1-217ENST00000534469 680 ntTSL 3 BASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 ANP32BP3-201ENST00000559213 706 ntBASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 HMGB1P6-201ENST00000569046 646 ntBASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 COX6CP3-201ENST00000580869 223 ntBASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 AL033523.1-201ENST00000605153 153 ntBASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 AL731566.2-201ENST00000618971 317 ntBASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 ZNF658B-202ENST00000615961 3375 ntBASIC1.93□□□□□ -2.1
TCRBV3S1A0A5B6 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 RNA5SP489-201ENST00000410986 109 ntBASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 Z75741.2-201ENST00000417272 1167 ntBASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 AC011753.1-201ENST00000451001 220 ntBASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 BX276092.4-201ENST00000452056 248 ntBASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 AL109933.2-201ENST00000452651 260 ntBASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 RPS24P6-201ENST00000452670 400 ntBASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 HIGD1AP3-201ENST00000515857 278 ntBASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 RNU4-29P-201ENST00000515943 174 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms