Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 RNU6-356P-201ENST00000384140 107 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 RNU6-1215P-201ENST00000384441 102 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 RNU6-821P-201ENST00000390995 107 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 RPS12P5-201ENST00000423449 371 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 SNORA71B-202ENST00000439232 272 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 FGF7P3-201ENST00000454645 303 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 snoU13.3-201ENST00000459441 104 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 KLF3P2-201ENST00000465138 268 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 HMGB1P25-201ENST00000468402 607 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AC010618.1-201ENST00000469924 477 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 PPIAP15-201ENST00000479662 484 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 RNU4-60P-201ENST00000517239 135 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 CDH12P4-201ENST00000517835 295 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 MTND1P5-201ENST00000517906 940 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 CDH12P3-201ENST00000517935 295 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 CDH12P1-201ENST00000518435 295 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AP003497.1-201ENST00000528472 562 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AP003122.4-201ENST00000530980 758 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 SETP7-201ENST00000552169 453 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AC245505.1-201ENST00000556398 224 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AC009063.1-201ENST00000563342 702 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 MIR4443-201ENST00000585052 53 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 LLPHP1-201ENST00000603571 367 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AC103710.1-201ENST00000610003 901 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AC008250.2-201ENST00000615261 205 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AC040168.1-201ENST00000623594 991 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 AC015813.6-201ENST00000624409 5808 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 RNU6-259P-201ENST00000383999 107 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 Y_RNA.493-201ENST00000384422 102 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 MIR199A2-201ENST00000385289 110 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 HSPE1P8-201ENST00000406997 288 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 AL359704.1-201ENST00000411586 781 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 ELOCP17-201ENST00000414751 326 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 HMGB3P23-201ENST00000414981 585 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 AC245052.5-201ENST00000416320 649 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 AL353777.1-201ENST00000425552 326 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 DNAJC19P4-201ENST00000440115 345 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 AL357520.1-201ENST00000441557 453 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 PPIAP3-201ENST00000450588 505 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 AC104308.1-201ENST00000454621 333 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 SNORD121B-201ENST00000458838 81 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 AC021382.1-201ENST00000483523 359 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 SETP2-201ENST00000553886 926 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 AC099489.2-201ENST00000574976 260 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 RNA5SP108-201ENST00000605921 117 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 AC008498.1-201ENST00000613012 531 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 AC013476.2-201ENST00000614456 459 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 AC091834.1-201ENST00000614543 472 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms