Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 GAS5-AS1-201ENST00000602767 694 ntBASIC2.43□□□□□ -2.02
TRAV40A0A0B4J280 IGHV3-29-201ENST00000604817 344 ntBASIC2.43□□□□□ -2.02
TRAV40A0A0B4J280 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.43□□□□□ -2.02
TRAV40A0A0B4J280 AC012531.5-201ENST00000611375 151 ntBASIC2.43□□□□□ -2.02
TRAV40A0A0B4J280 DUXAP10-204ENST00000612052 616 ntBASIC2.43□□□□□ -2.02
TRAV40A0A0B4J280 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.43□□□□□ -2.02
TRAV40A0A0B4J280 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
TRAV40A0A0B4J280 AL590240.3-201ENST00000621416 943 ntBASIC2.43□□□□□ -2.02
TRAV40A0A0B4J280 MIR6852-201ENST00000621699 66 ntBASIC2.43□□□□□ -2.02
TRAV40A0A0B4J280 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.43□□□□□ -2.02
TRAV40A0A0B4J280 AC073348.1-201ENST00000623002 331 ntBASIC2.43□□□□□ -2.02
TRAV40A0A0B4J280 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.43□□□□□ -2.02
TRAV40A0A0B4J280 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.43□□□□□ -2.02
TRAV40A0A0B4J280 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.43□□□□□ -2.02
TRAV40A0A0B4J280 U6.98-201ENST00000637157 84 ntBASIC2.43□□□□□ -2.02
TRAV40A0A0B4J280 MTND5P28-201ENST00000438005 1594 ntBASIC2.43□□□□□ -2.02
TRAV40A0A0B4J280 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
TRAV40A0A0B4J280 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.43□□□□□ -2.02
TRAV40A0A0B4J280 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
TRAV40A0A0B4J280 AL355578.1-201ENST00000607405 1328 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 SNORA9.2-201ENST00000365361 133 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 RNU6-906P-201ENST00000384700 70 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 MIR124-3-201ENST00000384866 87 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 RN7SKP58-201ENST00000411010 305 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 RPS3AP9-201ENST00000417027 792 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 MTCO3P1-205ENST00000422088 832 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AC005517.2-201ENST00000424673 553 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 CKS1BP5-201ENST00000434172 273 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AC244505.4-201ENST00000434905 287 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 RPS12P18-201ENST00000442381 270 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 SSXP5-201ENST00000443473 287 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 RN7SL20P-201ENST00000488827 297 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AC091951.3-201ENST00000504093 246 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AC107016.2-201ENST00000547968 190 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AC074051.3-201ENST00000570238 358 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 MIR3912-201ENST00000577566 105 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AL035411.2-201ENST00000604022 421 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AC105148.1-201ENST00000604961 409 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AL450336.1-201ENST00000605180 586 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AC091946.2-201ENST00000606105 291 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AP001521.1-201ENST00000609150 300 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AC092106.3-201ENST00000611308 722 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AC090772.4-201ENST00000623599 362 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AC010733.2-201ENST00000589496 5702 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 AL139811.1-201ENST00000424779 2299 ntBASIC2.42□□□□□ -2.02
TRAV40A0A0B4J280 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 AC118273.1-201ENST00000525324 3006 ntBASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 HMGB1P5-201ENST00000255320 642 ntBASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 RNU6-492P-201ENST00000363035 104 ntBASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 RNU5D-1-201ENST00000363299 116 ntBASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 U3.6-201ENST00000363622 211 ntBASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 AC016769.3-201ENST00000396562 315 ntBASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 ARF4P3-201ENST00000397387 509 ntBASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 RNA5SP274-201ENST00000410484 108 ntBASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 AC068533.2-201ENST00000411872 306 ntBASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 TOMM22P1-201ENST00000418578 312 ntBASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 ELOCP6-201ENST00000429066 328 ntBASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 FGF7P5-201ENST00000441829 291 ntBASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 RPL23AP33-201ENST00000442301 452 ntBASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 AL589880.1-201ENST00000448271 287 ntBASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 ZNF886P-201ENST00000450781 723 ntBASIC2.41□□□□□ -2.02
TRAV40A0A0B4J280 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms