Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 AC007954.1-201ENST00000554198 494 ntBASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 CKS1BP1-201ENST00000555221 240 ntBASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 AC011471.1-201ENST00000585766 187 ntBASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 RPL23AP78-201ENST00000599928 470 ntBASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 ATP1B3P1-201ENST00000605365 821 ntBASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 AC104820.1-201ENST00000624183 307 ntBASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 AL109659.3-201ENST00000624985 950 ntBASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 AC092608.3-201ENST00000625017 386 ntBASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 AC068620.4-201ENST00000636730 1182 ntBASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 AC017104.5-201ENST00000637647 639 ntBASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 SNORA5B-201ENST00000363786 132 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 RNU1-112P-201ENST00000364401 164 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 FO393413.1-201ENST00000402892 195 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 AC114973.1-201ENST00000429057 632 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 MTND4LP14-201ENST00000429447 288 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 AC010881.1-201ENST00000433830 235 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 AL645638.1-201ENST00000440519 361 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 AL031183.1-201ENST00000457667 207 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 CABYRP1-201ENST00000465493 1045 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 AC093663.2-201ENST00000484625 313 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 AC096751.1-202ENST00000502691 1067 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 VN1R104P-201ENST00000505115 1009 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 RNU6-751P-201ENST00000516382 101 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 AL133271.1-201ENST00000538229 291 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 AC079600.2-201ENST00000550076 130 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 AC106782.4-201ENST00000568264 210 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 HSPE1P14-201ENST00000605812 302 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 AC021851.1-201ENST00000608537 1082 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 FRG1HP-204ENST00000617940 757 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 AP003400.6-201ENST00000624698 740 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 FRG1DP-201ENST00000635586 771 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 TAB3P1-202ENST00000452645 1634 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 AC011460.1-201ENST00000636268 1834 ntBASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.12□□□□□ -2.07
TRAV41A0A0B4J266 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 RNU6-859P-201ENST00000362728 107 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 RNU6-989P-201ENST00000362756 107 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 RNU6-1151P-201ENST00000384684 107 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 RNA5SP252-201ENST00000391131 119 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AL360182.1-201ENST00000397433 468 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 MTND4P13-201ENST00000402078 1023 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 ATP5F1P6-201ENST00000402768 767 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 RNU6-272P-201ENST00000411028 104 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AL096701.2-201ENST00000416920 238 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 PAICSP7-201ENST00000419829 962 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AC112220.1-201ENST00000434628 355 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 LSM1P1-201ENST00000438629 273 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 DYNLL1P6-201ENST00000503440 264 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 SETP12-201ENST00000514068 805 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AC096725.1-201ENST00000514266 313 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 RN7SKP132-201ENST00000516001 208 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms