Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 AC096533.1-201ENST00000411645 353 ntBASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 HSFY1P1-201ENST00000423928 1178 ntBASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 AL160175.1-201ENST00000428124 247 ntBASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 AC092427.1-202ENST00000430569 476 ntBASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 MTCYBP34-201ENST00000439552 670 ntBASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 AC011816.1-201ENST00000441346 546 ntBASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 AC006445.2-201ENST00000510061 472 ntBASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 AC133963.2-201ENST00000513686 578 ntBASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 AC034159.1-201ENST00000513885 583 ntBASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 AC026801.2-201ENST00000515352 425 ntBASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 IGKV2D-36-201ENST00000518643 226 ntBASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 OR10V3P-201ENST00000525712 725 ntBASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 EIF4BP1-201ENST00000554881 351 ntBASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 MIR5092-201ENST00000583139 88 ntBASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 RPL23AP92-201ENST00000603609 255 ntBASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 AC245100.7-201ENST00000609678 442 ntBASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 AL137847.3-201ENST00000611521 109 ntBASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 AP000526.1-201ENST00000603308 1388 ntBASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 FRG1BP-201ENST00000278882 761 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 SNORA1.3-201ENST00000384676 136 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 MIR144-201ENST00000384886 86 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 PRRC2CP1-201ENST00000404428 159 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 RPS4XP7-201ENST00000406274 780 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 AF274854.1-201ENST00000413236 615 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 RPLP0P7-201ENST00000416050 667 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 AC019097.1-201ENST00000424783 735 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 AC063976.3-201ENST00000426849 329 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 AC096632.1-201ENST00000427395 310 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 AC025750.2-201ENST00000442609 450 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 SNORD109B-201ENST00000458961 67 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 SNORD109A-201ENST00000459128 67 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 AC135721.1-201ENST00000497954 479 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 AC008494.2-201ENST00000514544 370 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 RN7SKP96-201ENST00000516948 297 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 RNU1-104P-201ENST00000517280 175 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 MTCO1P47-201ENST00000523889 1271 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 AP003102.1-201ENST00000525638 661 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 AC123904.3-201ENST00000547218 814 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 PRELID2P1-201ENST00000552837 301 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 POLR2KP1-201ENST00000553226 168 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 AC090751.1-201ENST00000566966 267 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 AP004372.1-201ENST00000604842 844 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 AC245517.5-201ENST00000611529 162 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 SGO1P2-201ENST00000429458 1589 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 AC012321.1-201ENST00000561622 1588 ntBASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
HLA-DRB4X5D2U9 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 ZNF519P1-201ENST00000449011 1626 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 AC090740.1-201ENST00000623193 2262 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 SNORD62.1-201ENST00000362541 86 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 RNU6-374P-201ENST00000364146 108 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 RNA5SP210-201ENST00000391034 120 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 AL139039.1-201ENST00000401900 692 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 AL356057.3-201ENST00000402607 340 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 RNU4-78P-201ENST00000410940 126 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms