Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 MIR4646-201ENST00000580775 63 ntBASIC1.18□□□□□ -2.22
LINC01558Q9Y6Z2 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC1.18□□□□□ -2.22
LINC01558Q9Y6Z2 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC1.18□□□□□ -2.22
LINC01558Q9Y6Z2 CKS1BP3-201ENST00000600888 237 ntBASIC1.18□□□□□ -2.22
LINC01558Q9Y6Z2 AC022001.1-201ENST00000605193 268 ntBASIC1.18□□□□□ -2.22
LINC01558Q9Y6Z2 ARF4P1-201ENST00000605447 541 ntBASIC1.18□□□□□ -2.22
LINC01558Q9Y6Z2 AC103710.4-201ENST00000609301 899 ntBASIC1.18□□□□□ -2.22
LINC01558Q9Y6Z2 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
LINC01558Q9Y6Z2 AL161423.1-201ENST00000613700 262 ntBASIC1.18□□□□□ -2.22
LINC01558Q9Y6Z2 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC1.18□□□□□ -2.22
LINC01558Q9Y6Z2 MIR6071-201ENST00000616741 78 ntBASIC1.18□□□□□ -2.22
LINC01558Q9Y6Z2 AC027309.3-201ENST00000623419 351 ntBASIC1.18□□□□□ -2.22
LINC01558Q9Y6Z2 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.18□□□□□ -2.22
LINC01558Q9Y6Z2 MTND4P27-201ENST00000450813 1354 ntBASIC1.18□□□□□ -2.22
LINC01558Q9Y6Z2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
LINC01558Q9Y6Z2 AL513185.3-201ENST00000433335 1300 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AC104446.1-201ENST00000613728 1321 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 RNU6-339P-201ENST00000384310 107 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 RNU6-31P-201ENST00000384388 108 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 U3.25-201ENST00000391209 220 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AL109941.1-201ENST00000401925 229 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 RNA5SP489-201ENST00000410986 109 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 RAB9AP3-201ENST00000412737 573 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 SNORD56-201ENST00000413522 71 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 USP12PX-201ENST00000432383 1057 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AC073063.1-201ENST00000434352 607 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AC092641.1-201ENST00000440229 772 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 RPL21P133-201ENST00000443666 476 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 TPT1P14-201ENST00000448018 505 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 RAB9AP1-201ENST00000449393 573 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 PMCHL2-203ENST00000457791 237 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AC104629.2-201ENST00000468627 598 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AC055731.1-201ENST00000474387 401 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AC008953.1-201ENST00000497334 318 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 RNF138P1-201ENST00000502765 546 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AC010460.1-201ENST00000507087 466 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 SCGB1D5P-201ENST00000515134 247 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AC007954.1-201ENST00000554198 494 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AC090888.3-201ENST00000558917 509 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AC022662.1-201ENST00000580252 331 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AP004372.1-201ENST00000604842 844 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AL450336.1-201ENST00000605180 586 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AL161616.1-201ENST00000611867 286 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AC004852.3-201ENST00000614131 326 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AC104307.1-201ENST00000616142 196 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 CR392039.5-201ENST00000623201 510 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 MIR492-201ENST00000638676 116 ntBASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
LINC01558Q9Y6Z2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 RNA5-8SP7-201ENST00000363443 155 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 SNORA71.1-201ENST00000364523 117 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 RNA5SP160-201ENST00000364866 120 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 OR5H15-201ENST00000383696 930 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 RNU6-1074P-201ENST00000383995 104 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AL122016.1-201ENST00000403365 367 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 HSFY4P-201ENST00000415994 1181 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 HMGN2P19-201ENST00000425149 265 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AC098614.2-201ENST00000426040 255 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AC112492.1-201ENST00000449607 712 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 ATG12P2-201ENST00000456830 416 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 MRPS17P9-201ENST00000511924 393 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AP005902.1-201ENST00000521358 186 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms