Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 RN7SKP31-201ENST00000516354 278 ntBASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 RN7SKP282-201ENST00000516824 299 ntBASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 AL049870.4-201ENST00000555741 486 ntBASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 AC245128.3-201ENST00000594721 748 ntBASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 VIS1.1-201ENST00000610517 203 ntBASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 AC097714.1-201ENST00000511272 1647 ntBASIC2.55□□□□□ -2
SCN10AQ9Y5Y9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.55□□□□□ -2
SCN10AQ9Y5Y9 RNU6-185P-201ENST00000384421 107 ntBASIC2.55□□□□□ -2
SCN10AQ9Y5Y9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
SCN10AQ9Y5Y9 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.55□□□□□ -2
SCN10AQ9Y5Y9 GAPDHP27-201ENST00000447427 1020 ntBASIC2.55□□□□□ -2
SCN10AQ9Y5Y9 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.55□□□□□ -2
SCN10AQ9Y5Y9 AC026464.5-201ENST00000562497 722 ntBASIC2.55□□□□□ -2
SCN10AQ9Y5Y9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
SCN10AQ9Y5Y9 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.55□□□□□ -2
SCN10AQ9Y5Y9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
SCN10AQ9Y5Y9 Z99496.1-201ENST00000469424 1477 ntBASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 AC241520.1-201ENST00000422654 1099 ntBASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 OR51AB1P-201ENST00000429046 620 ntBASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 Z98742.2-201ENST00000431564 187 ntBASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 AL591806.2-201ENST00000433122 173 ntBASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 AL035407.2-201ENST00000454090 378 ntBASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 AC068587.2-201ENST00000478386 781 ntBASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 RPL21P99-201ENST00000480369 423 ntBASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 AC106872.3-201ENST00000495104 446 ntBASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 MTND4P2-201ENST00000507767 1203 ntBASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 AL136981.2-201ENST00000617319 734 ntBASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 RNU6-31P-201ENST00000384388 108 ntBASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 RN7SKP32-201ENST00000410167 303 ntBASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 AC093151.1-201ENST00000427711 313 ntBASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 HSPE1P28-201ENST00000443139 211 ntBASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 RPL36AP33-201ENST00000450395 310 ntBASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 GAPDHP39-201ENST00000481866 979 ntBASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 MTCO3P35-201ENST00000485582 781 ntBASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 SNRPGP18-201ENST00000553000 214 ntBASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 HMGB1P51-201ENST00000605166 638 ntBASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 BX664608.1-201ENST00000610519 487 ntBASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SCN10AQ9Y5Y9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SCN10AQ9Y5Y9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.53□□□□□ -2
SCN10AQ9Y5Y9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.53□□□□□ -2
SCN10AQ9Y5Y9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.53□□□□□ -2
SCN10AQ9Y5Y9 RNU6-244P-201ENST00000391028 104 ntBASIC2.53□□□□□ -2
SCN10AQ9Y5Y9 AL023284.1-201ENST00000403956 276 ntBASIC2.53□□□□□ -2
SCN10AQ9Y5Y9 GSTA9P-201ENST00000406231 611 ntBASIC2.53□□□□□ -2
SCN10AQ9Y5Y9 AC234782.4-201ENST00000417646 1048 ntBASIC2.53□□□□□ -2
SCN10AQ9Y5Y9 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.53□□□□□ -2
SCN10AQ9Y5Y9 snoU13.7-201ENST00000459220 104 ntBASIC2.53□□□□□ -2
SCN10AQ9Y5Y9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.53□□□□□ -2
SCN10AQ9Y5Y9 AC133963.2-201ENST00000513686 578 ntBASIC2.53□□□□□ -2
SCN10AQ9Y5Y9 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
SCN10AQ9Y5Y9 TRAV37-201ENST00000553906 342 ntBASIC2.53□□□□□ -2
SCN10AQ9Y5Y9 HMGN2P28-201ENST00000606102 262 ntBASIC2.53□□□□□ -2
SCN10AQ9Y5Y9 NF1P10-201ENST00000613227 742 ntBASIC2.53□□□□□ -2
SCN10AQ9Y5Y9 CUL1P1-201ENST00000509510 2425 ntBASIC2.53□□□□□ -2.01
SCN10AQ9Y5Y9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 SAR1AP2-201ENST00000392696 594 ntBASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 SNORD88.1-201ENST00000408684 91 ntBASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 RNU6-564P-201ENST00000410983 104 ntBASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 RNA5SP247-201ENST00000411181 105 ntBASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 AC006548.1-201ENST00000427470 102 ntBASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 RPL7P12-201ENST00000446719 750 ntBASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 AL627224.1-201ENST00000448334 444 ntBASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 RN7SL283P-201ENST00000489055 303 ntBASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 XKRY-201ENST00000510392 1100 ntBASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 ELOCP31-201ENST00000540463 467 ntBASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 AC105137.2-201ENST00000569073 466 ntBASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 AC009318.2-201ENST00000610917 651 ntBASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 CR381572.1-201ENST00000625098 102 ntBASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms