Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 RNU6-50P-201ENST00000362356 103 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 RNU6-76P-201ENST00000384060 104 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 RNU6-348P-201ENST00000384386 107 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 RNU2-16P-201ENST00000410712 136 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 ELOCP17-201ENST00000414751 326 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 CRYBB2P1-203ENST00000415709 538 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 PPP1R11P2-201ENST00000423543 382 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 MTATP6P4-201ENST00000427725 675 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AC119618.1-201ENST00000434191 222 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 RPL23AP52-201ENST00000439311 478 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AC093156.1-201ENST00000440382 670 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 RPL21P133-201ENST00000443666 476 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 RPL21P89-201ENST00000444021 467 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 ELOCP30-201ENST00000447108 299 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AL162389.1-201ENST00000449233 177 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 MTND1P12-201ENST00000455231 147 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 MTCO2P32-201ENST00000514865 403 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 IGLV3-26-201ENST00000520756 302 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 ERHP1-201ENST00000523006 310 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 TRAV8-5-201ENST00000537369 341 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AC135001.1-201ENST00000544546 283 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AL352979.3-201ENST00000553515 247 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AC007424.1-203ENST00000554613 687 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AC099489.2-201ENST00000574976 260 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AC012213.3-201ENST00000577199 777 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AC004223.2-201ENST00000590309 544 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AL049634.3-201ENST00000604968 457 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 ARF4P1-201ENST00000605447 541 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AC108747.1-201ENST00000609508 535 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AC245517.5-201ENST00000611529 162 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AL021997.2-201ENST00000615674 271 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 uc_338.12-201ENST00000616344 181 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AC004825.2-201ENST00000616634 455 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 MIR7154-201ENST00000620673 73 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 AC091953.2-201ENST00000623979 160 ntBASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.84□□□□□ -1.63
COL4A3BPQ9Y5P4 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.84□□□□□ -1.64
COL4A3BPQ9Y5P4 AC027290.2-201ENST00000623210 18662 ntBASIC4.84□□□□□ -1.64
COL4A3BPQ9Y5P4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.64
COL4A3BPQ9Y5P4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 RNU1-132P-201ENST00000364300 164 ntBASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 RNY4P34-201ENST00000364779 95 ntBASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 RNA5SP366-201ENST00000365454 123 ntBASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 SNORD116-4-201ENST00000384733 96 ntBASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 MIR1911-201ENST00000410783 80 ntBASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 RPL23AP26-201ENST00000412728 464 ntBASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 UBE2FP1-201ENST00000416536 447 ntBASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 KLF3P2-201ENST00000465138 268 ntBASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 RPL35AP15-201ENST00000468042 339 ntBASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 AC108860.1-201ENST00000484521 383 ntBASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 NIPA2P2-201ENST00000496376 1083 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms