Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 MIR513B-201ENST00000385136 84 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 MTATP6P27-201ENST00000416987 621 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 MTCO2P17-201ENST00000424336 677 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 AC005326.1-201ENST00000429197 123 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 AC011742.1-201ENST00000431448 434 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 AC096638.2-201ENST00000434965 711 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 COX7BP2-201ENST00000437976 242 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 AL356535.1-201ENST00000440335 398 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 HSPE1P28-201ENST00000443139 211 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 RPL21P134-201ENST00000453468 483 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 RPL21P10-201ENST00000463521 490 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 RPS15AP17-201ENST00000470598 390 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 RPS23P3-201ENST00000470993 430 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 RPL7P38-201ENST00000488396 739 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 RPL7P24-201ENST00000493052 752 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 SETP14-201ENST00000497538 873 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 RAC1P2-201ENST00000511164 579 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 IGHV3-76-201ENST00000522465 295 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 MTCO2P15-201ENST00000532655 656 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 NBEAP1-201ENST00000554452 979 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 MIR5186-201ENST00000577504 120 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 FAM60BP-201ENST00000578364 658 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 OR4K7P-201ENST00000580232 945 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 AC091057.2-201ENST00000602594 792 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 AC012669.1-201ENST00000603209 283 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 AC069209.1-201ENST00000619282 651 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 AC013470.4-201ENST00000619978 986 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 AC095031.1-201ENST00000623685 672 ntBASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.54□□□□□ -1.84
PCDHGA1Q9Y5H4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 OR4G11P-202ENST00000642116 1414 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AC093908.1-201ENST00000623125 8092 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AC090740.1-201ENST00000623193 2262 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 RNU6-621P-201ENST00000364752 109 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AL591034.1-201ENST00000407447 340 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 RHEBP3-201ENST00000411920 351 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AC092447.6-201ENST00000414578 210 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 RPL7P30-201ENST00000420888 709 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AC245054.1-201ENST00000420944 258 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 MTCO2P5-201ENST00000422621 426 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 ATP5HP2-201ENST00000433885 485 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AC004866.2-201ENST00000438285 481 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AL591503.2-201ENST00000442314 1005 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 RPL12P26-201ENST00000452430 487 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 TRGVB-201ENST00000453257 471 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 VN1R40P-201ENST00000455196 941 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 RPL18AP17-201ENST00000455326 198 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AC008155.2-201ENST00000464337 397 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AC084198.1-201ENST00000477747 402 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 RPL31P61-201ENST00000496160 376 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AC116353.3-201ENST00000511215 249 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 RNU2-27P-201ENST00000516185 142 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AC104986.1-201ENST00000517978 436 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AP001804.3-201ENST00000525146 880 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 MTND1P24-201ENST00000552175 861 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 MIR3186-201ENST00000577404 85 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AL109653.1-201ENST00000603091 248 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AC006077.1-201ENST00000604746 343 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AL137849.1-201ENST00000604767 169 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AL034351.1-201ENST00000605288 668 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms