Protein–RNA interactions for Protein: Q9Y3E7

CHMP3, Charged multivesicular body protein 3, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3Q9Y3E7 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 AC027228.2-201ENST00000567141 2154 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 TAB3P1-202ENST00000452645 1634 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 Y_RNA.167-201ENST00000363735 109 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 RNU6-1226P-201ENST00000384317 107 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 MIR19A-201ENST00000384878 82 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 CYB5AP4-201ENST00000396692 399 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 U3.32-201ENST00000408116 212 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 AC108734.1-201ENST00000439549 399 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 AC107399.1-201ENST00000451226 265 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 AL162395.1-201ENST00000457882 422 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 AC245028.2-201ENST00000458673 253 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 RNU6-1218P-201ENST00000458990 108 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 RNU7-180P-201ENST00000459240 63 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 AP001992.1-205ENST00000462248 379 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 AC021382.1-201ENST00000483523 359 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 FTH1P21-201ENST00000512179 511 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 SMURF2P1-201ENST00000514992 481 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 AC110588.1-201ENST00000559699 137 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 MIR3667-201ENST00000581025 74 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 BNIP3P25-201ENST00000596023 559 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 7SK.7-201ENST00000603504 247 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 AC020910.3-201ENST00000603701 874 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 AC010680.4-201ENST00000605334 543 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 AC092807.2-201ENST00000609367 243 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 RMST_9.1-201ENST00000619945 193 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 AC004817.4-201ENST00000602396 3625 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 AC244517.1-201ENST00000606030 2086 ntBASIC6.18□□□□□ -1.42
CHMP3Q9Y3E7 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 HSPE1P11-201ENST00000339579 310 ntBASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 RNA5SP258-201ENST00000362750 119 ntBASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 RNU5A-8P-201ENST00000364102 114 ntBASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 RNU6-1318P-201ENST00000365389 103 ntBASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 RNU6-1013P-201ENST00000384180 107 ntBASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 CISD1P1-201ENST00000393907 327 ntBASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 RN7SKP247-201ENST00000411094 308 ntBASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 NUP35P1-201ENST00000422734 947 ntBASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 RNU7-182P-201ENST00000459009 62 ntBASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 AL135752.1-201ENST00000479477 471 ntBASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 AC025164.1-201ENST00000496249 478 ntBASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 AC091885.1-201ENST00000506658 268 ntBASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 AC093853.1-201ENST00000515689 483 ntBASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 MIR3149-201ENST00000584629 83 ntBASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 RPL23AP92-201ENST00000603609 255 ntBASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 AC011373.1-201ENST00000607270 237 ntBASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 AC119674.1-207ENST00000641355 633 ntBASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 AC009902.3-201ENST00000606235 2172 ntBASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CHMP3Q9Y3E7 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 AC091046.3-201ENST00000631455 1574 ntBASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 AL139276.1-201ENST00000311910 1001 ntBASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 RPL32P3-201ENST00000359025 275 ntBASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 Y_RNA.148-201ENST00000363557 117 ntBASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 RNA5SP87-201ENST00000384155 118 ntBASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 RN7SKP158-201ENST00000410453 326 ntBASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 AC009302.1-201ENST00000417147 390 ntBASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 AL450023.3-201ENST00000440592 271 ntBASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 RPL21P89-201ENST00000444021 467 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms