Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 RNU6-1122P-201ENST00000384449 107 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 RNU6-882P-201ENST00000391025 103 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 SOD2P1-201ENST00000396543 562 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 FAT1P1-201ENST00000406588 507 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 AC106883.1-201ENST00000418805 562 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 AL035423.1-201ENST00000420331 213 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 RPL27AP8-201ENST00000424277 446 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 HSPD1P21-201ENST00000436541 245 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 MTND4P6-201ENST00000438297 472 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 AL031313.1-201ENST00000448435 256 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 RPL36AP33-201ENST00000450395 310 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 DUXAP8-207ENST00000456786 622 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 AC104164.3-201ENST00000467363 1258 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 AL049873.1-201ENST00000480540 376 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 HMGB1P28-201ENST00000507778 552 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 PHBP14-201ENST00000512887 367 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 RN7SKP31-201ENST00000516354 278 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 RN7SKP83-201ENST00000516512 178 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 SNORD59.2-201ENST00000516873 68 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 AC007991.1-201ENST00000522680 631 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 AC022861.1-201ENST00000522981 663 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 OR7E13P-201ENST00000526052 910 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 SLC2A13P1-201ENST00000531560 322 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 AC006960.3-201ENST00000561845 705 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 AP002826.1-201ENST00000608835 315 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 AC009570.1-201ENST00000609599 745 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 TUG1_1.1-201ENST00000610654 145 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 DUXAP10-204ENST00000612052 616 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 AC025588.4-201ENST00000615802 908 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.38□□□□□ -1.87
RPH3AQ9Y2J0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 AP002907.1-201ENST00000606361 1430 ntBASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 Y_RNA.500-201ENST00000384466 111 ntBASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 SNORA40.2-201ENST00000390847 128 ntBASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 SNORA48.2-201ENST00000390926 124 ntBASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 RNA5SP424-201ENST00000390988 115 ntBASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 SNORA48.8-201ENST00000391324 134 ntBASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 HSPE1P8-201ENST00000406997 288 ntBASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 AC005297.2-201ENST00000450430 606 ntBASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 MTCO3P16-201ENST00000454456 754 ntBASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 RNA5SP310-201ENST00000459084 116 ntBASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 AC106707.2-201ENST00000484182 374 ntBASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 CBX3P3-201ENST00000508108 532 ntBASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 RN7SKP57-201ENST00000517248 293 ntBASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 MIR5187-201ENST00000583479 76 ntBASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 MIR3922-201ENST00000585192 84 ntBASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 AC004987.4-201ENST00000603383 338 ntBASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 AC011458.1-201ENST00000604034 617 ntBASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 MIR6076-201ENST00000617521 113 ntBASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPH3AQ9Y2J0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms