Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 OR5J1P-201ENST00000313544 939 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 SNORD62.1-201ENST00000362541 86 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 RNU6-859P-201ENST00000362728 107 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 FO393413.1-201ENST00000402892 195 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 Z86062.1-201ENST00000406773 777 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 AL590664.1-201ENST00000448065 339 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 OR5H5P-201ENST00000503164 928 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 AC006445.2-201ENST00000510061 472 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 AC034159.1-201ENST00000513885 583 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 RNU6-202P-201ENST00000515998 96 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 AC087373.1-201ENST00000524920 491 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 AC243972.3-201ENST00000539655 198 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 AC004486.1-201ENST00000546846 233 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 MIR3670-2-201ENST00000582974 65 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 MIR3670-1-201ENST00000584160 65 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 MIR3670-3-201ENST00000584855 65 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 AC020895.1-201ENST00000595362 272 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 AC025588.3-201ENST00000604182 274 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 AL161756.2-201ENST00000604597 246 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 ATP1B3P1-201ENST00000605365 821 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 AC007619.2-201ENST00000605743 379 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 MIR3670-4-201ENST00000612260 65 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 AC046144.1-201ENST00000478559 1853 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 AC090740.1-201ENST00000623193 2262 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 AC138915.1-201ENST00000565427 1685 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 AL139095.1-201ENST00000404326 391 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 HMGN2P35-201ENST00000412164 270 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 AC080125.1-201ENST00000414888 684 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 BX682237.1-201ENST00000415016 335 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 PTP4A1P3-201ENST00000433661 420 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 AC000041.1-201ENST00000439655 175 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 AL645638.1-201ENST00000440519 361 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 AC068135.1-201ENST00000446164 246 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 AP000705.1-201ENST00000454567 350 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 SNORD109B-201ENST00000458961 67 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 SNORD109A-201ENST00000459128 67 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 RPS3AP14-201ENST00000483907 780 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 AC096751.1-202ENST00000502691 1067 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 SEM1P1-201ENST00000506694 209 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 SETP12-201ENST00000514068 805 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 SNORA31.8-201ENST00000516327 108 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 RNU6-889P-201ENST00000517189 103 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 HMGB1P41-201ENST00000520234 440 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 CKS1BP7-201ENST00000522230 235 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 OR5AK3P-201ENST00000527486 1297 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 OR5BN1P-201ENST00000532955 829 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 SNRPGP16-201ENST00000533275 226 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 AC090666.1-201ENST00000578241 445 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 AL356575.1-201ENST00000603008 283 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 HSPE1P14-201ENST00000605812 302 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 LINC00216-201ENST00000623548 1126 ntBASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.44□□□□□ -2.02
VPS29Q9UBQ0 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 RNA5SP139-201ENST00000364340 117 ntBASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 AL121578.1-201ENST00000428051 892 ntBASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 RPS12P2-201ENST00000439728 269 ntBASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 RAD1P2-201ENST00000446414 663 ntBASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 AP000936.2-201ENST00000447151 681 ntBASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 AC234775.1-201ENST00000454247 670 ntBASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 SETP6-201ENST00000479329 568 ntBASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 AC097462.2-201ENST00000504623 481 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms