Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AL449283.1-202ENST00000418249 604 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AL354692.1-201ENST00000423044 315 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 RPL21P66-201ENST00000426566 466 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 VDAC1P3-201ENST00000434069 851 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 HMGB3P11-201ENST00000440127 604 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 MTCO1P53-201ENST00000441633 699 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 RSL24D1P3-201ENST00000449255 495 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AC112492.1-201ENST00000449607 712 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 RPS24P6-201ENST00000452670 400 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 snoU109.3-201ENST00000459477 145 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AC092757.1-201ENST00000467293 467 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 RPL23AP55-201ENST00000498163 452 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 PRELID3BP6-201ENST00000503839 571 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 HMGB1P22-201ENST00000505315 124 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AC010460.2-201ENST00000509054 677 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AC113347.3-201ENST00000509113 148 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 MTATP6P9-201ENST00000515039 680 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 RNA5SP341-201ENST00000516261 117 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 RN7SKP244-201ENST00000516513 307 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 RNU6-1073P-201ENST00000517182 106 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AL121603.1-201ENST00000553815 142 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 ZNF192P1-203ENST00000565888 810 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 MIR3690-201ENST00000580266 75 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AC128687.1-201ENST00000605304 619 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AL136370.1-201ENST00000608166 691 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AL133445.2-201ENST00000611191 527 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AC104763.3-201ENST00000613765 618 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AL445984.1-201ENST00000637834 659 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AC007496.3-201ENST00000624987 3443 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 AC093908.1-201ENST00000623125 8092 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 AC116096.1-201ENST00000566804 2314 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 AL353746.1-201ENST00000566293 6881 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 OR1S2-201ENST00000302592 978 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 MIR422A-201ENST00000362286 90 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 AP002088.1-201ENST00000382740 395 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 ARF4P3-201ENST00000397387 509 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 RNU2-71P-201ENST00000411395 189 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 RAD23BP2-201ENST00000416003 1207 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 MRPS36P1-201ENST00000421291 307 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 SDR42E1P3-201ENST00000438345 502 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 VN1R10P-201ENST00000447106 875 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 S100A11P2-201ENST00000467589 312 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 VN1R17P-201ENST00000472048 1090 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 RPL21P131-201ENST00000497298 483 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 MTCYBP16-201ENST00000509187 1129 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 SNORA31.20-201ENST00000517111 133 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 UBL5P2-201ENST00000583788 219 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 AL139022.2-201ENST00000606934 443 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 AC024257.5-201ENST00000612739 531 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 AL162274.2-201ENST00000614406 332 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 AC040168.1-201ENST00000623594 991 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 AC092184.1-201ENST00000625042 715 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 SNORA50A-202ENST00000629536 136 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 MIR622-201ENST00000638396 96 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 AC107982.1-201ENST00000507171 1300 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 OR5BR1P-201ENST00000524992 1330 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 MTCO1P23-201ENST00000415223 1526 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms