Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.26□□□□□ -2.05
CCDC88CQ9P219 AC074029.1-201ENST00000552531 1044 ntBASIC2.26□□□□□ -2.05
CCDC88CQ9P219 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CCDC88CQ9P219 AC009977.1-201ENST00000586015 570 ntBASIC2.26□□□□□ -2.05
CCDC88CQ9P219 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC88CQ9P219 DUXAP3-201ENST00000603616 594 ntBASIC2.26□□□□□ -2.05
CCDC88CQ9P219 AC135803.1-201ENST00000608748 565 ntBASIC2.26□□□□□ -2.05
CCDC88CQ9P219 AC131902.3-201ENST00000611767 581 ntBASIC2.26□□□□□ -2.05
CCDC88CQ9P219 MIR6766-201ENST00000622641 72 ntBASIC2.26□□□□□ -2.05
CCDC88CQ9P219 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC88CQ9P219 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC88CQ9P219 MTND5P3-201ENST00000438536 1800 ntBASIC2.26□□□□□ -2.05
CCDC88CQ9P219 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.26□□□□□ -2.05
CCDC88CQ9P219 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC88CQ9P219 MIR21-201ENST00000362134 72 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 AL445529.1-201ENST00000398713 389 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 AL023284.1-201ENST00000403956 276 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC88CQ9P219 RAD23BP2-201ENST00000416003 1207 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 Z77249.1-201ENST00000444622 1175 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 RPS26P21-201ENST00000475397 348 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 YWHAEP4-201ENST00000505390 198 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CCDC88CQ9P219 AC108157.1-201ENST00000510511 539 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 MTCO2P32-201ENST00000514865 403 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 RNA5SP468-201ENST00000516782 93 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 AC021269.2-201ENST00000532318 330 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC88CQ9P219 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC88CQ9P219 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC88CQ9P219 AC138473.1-201ENST00000605717 526 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC88CQ9P219 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC88CQ9P219 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CCDC88CQ9P219 METTL21EP-201ENST00000298105 713 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 RNU6-31P-201ENST00000384388 108 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 RN7SKP140-201ENST00000411196 284 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 MTCO2P17-201ENST00000424336 677 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 OR51AB1P-201ENST00000429046 620 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 XKRYP6-201ENST00000440468 1116 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 XKRYP3-201ENST00000442113 1116 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 AL513343.1-201ENST00000451818 792 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC88CQ9P219 AP001317.1-201ENST00000531194 960 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC88CQ9P219 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC88CQ9P219 AC006023.2-201ENST00000609916 167 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 AL162233.1-201ENST00000620014 944 ntBASIC2.25□□□□□ -2.05
CCDC88CQ9P219 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC88CQ9P219 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
CCDC88CQ9P219 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CCDC88CQ9P219 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CCDC88CQ9P219 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CCDC88CQ9P219 BTBD10P2-201ENST00000404779 676 ntBASIC2.24□□□□□ -2.05
CCDC88CQ9P219 MIR1250-201ENST00000408098 113 ntBASIC2.24□□□□□ -2.05
CCDC88CQ9P219 RNU4-53P-201ENST00000410828 140 ntBASIC2.24□□□□□ -2.05
CCDC88CQ9P219 HMGN2P3-201ENST00000433603 273 ntBASIC2.24□□□□□ -2.05
CCDC88CQ9P219 HMGN2P5-201ENST00000436882 273 ntBASIC2.24□□□□□ -2.05
CCDC88CQ9P219 MTND3P6-201ENST00000485242 339 ntBASIC2.24□□□□□ -2.05
CCDC88CQ9P219 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.24□□□□□ -2.05
CCDC88CQ9P219 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC88CQ9P219 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.24□□□□□ -2.05
CCDC88CQ9P219 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
CCDC88CQ9P219 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.24□□□□□ -2.05
CCDC88CQ9P219 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC88CQ9P219 MIR4435-1-201ENST00000582552 80 ntBASIC2.24□□□□□ -2.05
CCDC88CQ9P219 AC046143.2-201ENST00000609789 160 ntBASIC2.24□□□□□ -2.05
CCDC88CQ9P219 AC110792.4-201ENST00000609843 298 ntBASIC2.24□□□□□ -2.05
CCDC88CQ9P219 MIR6715A-201ENST00000615929 79 ntBASIC2.24□□□□□ -2.05
CCDC88CQ9P219 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.24□□□□□ -2.05
CCDC88CQ9P219 RNA5SP492-201ENST00000411330 114 ntBASIC2.24□□□□□ -2.05
CCDC88CQ9P219 AL135786.1-201ENST00000415892 214 ntBASIC2.24□□□□□ -2.05
CCDC88CQ9P219 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.24□□□□□ -2.05
CCDC88CQ9P219 AL137014.1-201ENST00000420490 1226 ntBASIC2.24□□□□□ -2.05
CCDC88CQ9P219 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC88CQ9P219 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CCDC88CQ9P219 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC88CQ9P219 RPL21P104-201ENST00000464143 478 ntBASIC2.24□□□□□ -2.05
CCDC88CQ9P219 AC017037.2-201ENST00000513850 890 ntBASIC2.24□□□□□ -2.05
CCDC88CQ9P219 AC104115.2-201ENST00000523026 687 ntBASIC2.24□□□□□ -2.05
CCDC88CQ9P219 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC88CQ9P219 AADACP1-206ENST00000561502 1193 ntBASIC2.24□□□□□ -2.05
CCDC88CQ9P219 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC88CQ9P219 AC073111.2-201ENST00000605657 1075 ntBASIC2.24□□□□□ -2.05
CCDC88CQ9P219 AC087241.4-201ENST00000612441 480 ntBASIC2.24□□□□□ -2.05
CCDC88CQ9P219 AC104237.2-201ENST00000612456 443 ntBASIC2.24□□□□□ -2.05
CCDC88CQ9P219 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.24□□□□□ -2.05
CCDC88CQ9P219 RNU6-185P-201ENST00000384421 107 ntBASIC2.23□□□□□ -2.05
CCDC88CQ9P219 CYCSP45-201ENST00000402289 315 ntBASIC2.23□□□□□ -2.05
CCDC88CQ9P219 ZNF736P10Y-201ENST00000403990 1110 ntBASIC2.23□□□□□ -2.05
CCDC88CQ9P219 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.23□□□□□ -2.05
CCDC88CQ9P219 AC244098.2-201ENST00000422068 99 ntBASIC2.23□□□□□ -2.05
CCDC88CQ9P219 RPL39P40-201ENST00000445481 146 ntBASIC2.23□□□□□ -2.05
CCDC88CQ9P219 RPS27AP1-201ENST00000475545 471 ntBASIC2.23□□□□□ -2.05
CCDC88CQ9P219 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC88CQ9P219 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.23□□□□□ -2.05
CCDC88CQ9P219 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CCDC88CQ9P219 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
CCDC88CQ9P219 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms