Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 PWAR6-201ENST00000552334 4618 ntBASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 RNA5SP119-201ENST00000362715 117 ntBASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 TAF9BP1-201ENST00000396646 746 ntBASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 RNU6-712P-201ENST00000410558 100 ntBASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 RNU6-55P-201ENST00000411092 107 ntBASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 RNU6-954P-201ENST00000411355 107 ntBASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 PSMA6P3-201ENST00000428242 164 ntBASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 COX7BP2-201ENST00000437976 242 ntBASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 ARPC3P5-201ENST00000448802 534 ntBASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 AC078785.3-201ENST00000476607 425 ntBASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 AC092451.1-201ENST00000480211 153 ntBASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 RN7SL293P-201ENST00000481765 281 ntBASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 TMEM251P1-201ENST00000503717 318 ntBASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 AC023050.2-201ENST00000544968 387 ntBASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 MIR3690-201ENST00000580266 75 ntBASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 AC006254.3-201ENST00000603353 884 ntBASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 AC131235.4-201ENST00000609288 620 ntBASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 AC079395.3-201ENST00000615161 484 ntBASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 AC013470.4-201ENST00000619978 986 ntBASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 AC004009.2-201ENST00000623016 728 ntBASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 U6.98-201ENST00000637157 84 ntBASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 ZNF826P-207ENST00000622273 1910 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 RNA5SP50-201ENST00000363731 107 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 RNA5SP171-201ENST00000391071 115 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 AL139421.1-201ENST00000423010 169 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 CYCSP43-201ENST00000438233 310 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 AL358232.1-201ENST00000448030 501 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 AC008155.2-201ENST00000464337 397 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 AC021205.2-201ENST00000480069 347 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 AC093663.1-201ENST00000497190 394 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 MTCYBP17-201ENST00000503579 789 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 AC091951.3-201ENST00000504093 246 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 RNY4P37-201ENST00000516225 96 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 RN7SKP60-201ENST00000516985 239 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 OR4P1P-201ENST00000530808 1136 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 AC011602.1-201ENST00000546484 331 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 AL512347.1-201ENST00000566420 503 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 MAGOH2P-202ENST00000584384 429 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 AC091057.2-201ENST00000602594 792 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 AC013244.3-201ENST00000605614 388 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 AC011816.2-201ENST00000607089 556 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 RMST_8.1-201ENST00000610287 165 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 AL355365.1-201ENST00000616480 294 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 AC116618.1-201ENST00000634617 774 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 AP000776.1-201ENST00000530032 1663 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 RIOK3P1-201ENST00000418778 1528 ntBASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.31□□□□□ -1.72
SMC4Q9NTJ3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 AC005539.1-201ENST00000443768 1479 ntBASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 AL356473.1-201ENST00000406203 1408 ntBASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 MTCO2P20-201ENST00000437339 673 ntBASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 Z73417.1-201ENST00000447373 778 ntBASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 AC004801.2-202ENST00000463559 283 ntBASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 AC097493.1-201ENST00000463958 372 ntBASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 AC010285.1-201ENST00000470580 392 ntBASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 TMED11P-201ENST00000479478 690 ntBASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 XKRY-201ENST00000510392 1100 ntBASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 CCNG2P1-201ENST00000549521 1000 ntBASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 AC010198.2-201ENST00000550612 259 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms