Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC104472.2-201ENST00000469035 601 ntBASIC2.52□□□□□ -2.01
CISHQ9NSE2 AC010285.1-201ENST00000470580 392 ntBASIC2.52□□□□□ -2.01
CISHQ9NSE2 AC010301.1-201ENST00000473936 355 ntBASIC2.52□□□□□ -2.01
CISHQ9NSE2 UBE2DNL-203ENST00000474922 222 ntBASIC2.52□□□□□ -2.01
CISHQ9NSE2 AC093770.1-201ENST00000511559 571 ntBASIC2.52□□□□□ -2.01
CISHQ9NSE2 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.52□□□□□ -2.01
CISHQ9NSE2 SETP2-201ENST00000553886 926 ntBASIC2.52□□□□□ -2.01
CISHQ9NSE2 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.52□□□□□ -2.01
CISHQ9NSE2 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.52□□□□□ -2.01
CISHQ9NSE2 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.52□□□□□ -2.01
CISHQ9NSE2 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.52□□□□□ -2.01
CISHQ9NSE2 DNAJC19P3-201ENST00000594491 331 ntBASIC2.52□□□□□ -2.01
CISHQ9NSE2 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CISHQ9NSE2 AC025034.2-201ENST00000623264 286 ntBASIC2.52□□□□□ -2.01
CISHQ9NSE2 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.52□□□□□ -2.01
CISHQ9NSE2 AC092447.7-201ENST00000422212 1621 ntBASIC2.52□□□□□ -2.01
CISHQ9NSE2 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
CISHQ9NSE2 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CISHQ9NSE2 RNA5SP289-201ENST00000362332 137 ntBASIC2.51□□□□□ -2.01
CISHQ9NSE2 U8.9-201ENST00000365667 134 ntBASIC2.51□□□□□ -2.01
CISHQ9NSE2 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.51□□□□□ -2.01
CISHQ9NSE2 RNU6-98P-201ENST00000384173 107 ntBASIC2.51□□□□□ -2.01
CISHQ9NSE2 AL121972.1-201ENST00000402023 252 ntBASIC2.51□□□□□ -2.01
CISHQ9NSE2 RN7SKP140-201ENST00000411196 284 ntBASIC2.51□□□□□ -2.01
CISHQ9NSE2 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.51□□□□□ -2.01
CISHQ9NSE2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.51□□□□□ -2.01
CISHQ9NSE2 RABEPKP1-201ENST00000440529 1026 ntBASIC2.51□□□□□ -2.01
CISHQ9NSE2 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.51□□□□□ -2.01
CISHQ9NSE2 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.51□□□□□ -2.01
CISHQ9NSE2 snoU13.3-201ENST00000459441 104 ntBASIC2.51□□□□□ -2.01
CISHQ9NSE2 AC017007.3-201ENST00000479865 435 ntBASIC2.51□□□□□ -2.01
CISHQ9NSE2 LINC00888-204ENST00000487386 421 ntBASIC2.51□□□□□ -2.01
CISHQ9NSE2 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CISHQ9NSE2 AC112673.1-201ENST00000513168 575 ntBASIC2.51□□□□□ -2.01
CISHQ9NSE2 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.51□□□□□ -2.01
CISHQ9NSE2 AP003467.2-201ENST00000520175 319 ntBASIC2.51□□□□□ -2.01
CISHQ9NSE2 AC019227.1-201ENST00000526902 510 ntBASIC2.51□□□□□ -2.01
CISHQ9NSE2 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.51□□□□□ -2.01
CISHQ9NSE2 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.51□□□□□ -2.01
CISHQ9NSE2 AC025281.1-201ENST00000567026 265 ntBASIC2.51□□□□□ -2.01
CISHQ9NSE2 AC106734.1-201ENST00000568646 663 ntBASIC2.51□□□□□ -2.01
CISHQ9NSE2 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC2.51□□□□□ -2.01
CISHQ9NSE2 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.51□□□□□ -2.01
CISHQ9NSE2 AL645944.1-201ENST00000603857 493 ntBASIC2.51□□□□□ -2.01
CISHQ9NSE2 AC008962.1-201ENST00000605729 304 ntBASIC2.51□□□□□ -2.01
CISHQ9NSE2 AL627309.6-201ENST00000606857 840 ntBASIC2.51□□□□□ -2.01
CISHQ9NSE2 AL359198.2-201ENST00000611836 194 ntBASIC2.51□□□□□ -2.01
CISHQ9NSE2 AC107905.1-201ENST00000616204 426 ntBASIC2.51□□□□□ -2.01
CISHQ9NSE2 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.51□□□□□ -2.01
CISHQ9NSE2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CISHQ9NSE2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CISHQ9NSE2 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.5□□□□□ -2.01
CISHQ9NSE2 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CISHQ9NSE2 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
CISHQ9NSE2 AL359893.1-201ENST00000447628 1580 ntBASIC2.5□□□□□ -2.01
CISHQ9NSE2 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CISHQ9NSE2 FRG1BP-201ENST00000278882 761 ntBASIC2.5□□□□□ -2.01
CISHQ9NSE2 MIR449A-201ENST00000362113 91 ntBASIC2.5□□□□□ -2.01
CISHQ9NSE2 SNORD114-30-201ENST00000364448 72 ntBASIC2.5□□□□□ -2.01
CISHQ9NSE2 RNU1-51P-201ENST00000365345 176 ntBASIC2.5□□□□□ -2.01
CISHQ9NSE2 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CISHQ9NSE2 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CISHQ9NSE2 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.5□□□□□ -2.01
CISHQ9NSE2 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.5□□□□□ -2.01
CISHQ9NSE2 XGY1-201ENST00000381172 446 ntBASIC2.5□□□□□ -2.01
CISHQ9NSE2 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CISHQ9NSE2 CD24P4-201ENST00000382840 243 ntBASIC2.5□□□□□ -2.01
CISHQ9NSE2 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CISHQ9NSE2 MTATP6P4-201ENST00000427725 675 ntBASIC2.5□□□□□ -2.01
CISHQ9NSE2 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.5□□□□□ -2.01
CISHQ9NSE2 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.5□□□□□ -2.01
CISHQ9NSE2 AC236972.1-201ENST00000433225 199 ntBASIC2.5□□□□□ -2.01
CISHQ9NSE2 RPL7P29-201ENST00000437151 728 ntBASIC2.5□□□□□ -2.01
CISHQ9NSE2 RPL23AP58-201ENST00000440453 469 ntBASIC2.5□□□□□ -2.01
CISHQ9NSE2 AP002345.1-201ENST00000456493 928 ntBASIC2.5□□□□□ -2.01
CISHQ9NSE2 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.5□□□□□ -2.01
CISHQ9NSE2 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.5□□□□□ -2.01
CISHQ9NSE2 RNA5SP24-201ENST00000516478 95 ntBASIC2.5□□□□□ -2.01
CISHQ9NSE2 SNORA31.20-201ENST00000517111 133 ntBASIC2.5□□□□□ -2.01
CISHQ9NSE2 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
CISHQ9NSE2 AP003122.3-201ENST00000526316 255 ntBASIC2.5□□□□□ -2.01
CISHQ9NSE2 AL157394.1-201ENST00000562983 1224 ntBASIC2.5□□□□□ -2.01
CISHQ9NSE2 AC107954.1-201ENST00000565906 727 ntBASIC2.5□□□□□ -2.01
CISHQ9NSE2 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.5□□□□□ -2.01
CISHQ9NSE2 AC079089.3-201ENST00000603094 673 ntBASIC2.5□□□□□ -2.01
CISHQ9NSE2 NTAN1P1-201ENST00000603150 646 ntBASIC2.5□□□□□ -2.01
CISHQ9NSE2 RPL23AP92-201ENST00000603609 255 ntBASIC2.5□□□□□ -2.01
CISHQ9NSE2 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.5□□□□□ -2.01
CISHQ9NSE2 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CISHQ9NSE2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
CISHQ9NSE2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CISHQ9NSE2 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CISHQ9NSE2 RNU4-82P-201ENST00000362443 140 ntBASIC2.49□□□□□ -2.01
CISHQ9NSE2 MIR7-1-201ENST00000384871 110 ntBASIC2.49□□□□□ -2.01
CISHQ9NSE2 RNA5SP181-201ENST00000410246 98 ntBASIC2.49□□□□□ -2.01
CISHQ9NSE2 ATG3P1-201ENST00000419507 911 ntBASIC2.49□□□□□ -2.01
CISHQ9NSE2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.49□□□□□ -2.01
CISHQ9NSE2 AC109583.1-201ENST00000432156 268 ntBASIC2.49□□□□□ -2.01
CISHQ9NSE2 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.49□□□□□ -2.01
CISHQ9NSE2 RPS15AP28-201ENST00000435088 386 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms