Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS45Q9NRW7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS45Q9NRW7 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
VPS45Q9NRW7 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS45Q9NRW7 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS45Q9NRW7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
VPS45Q9NRW7 SNORA71.3-201ENST00000362582 128 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 Y_RNA.97-201ENST00000363094 102 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 RNA5SP189-201ENST00000364920 115 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 RNA5SP167-201ENST00000365461 116 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
VPS45Q9NRW7 RNU6-1042P-201ENST00000384204 107 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS45Q9NRW7 MIR1179-201ENST00000408703 91 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS45Q9NRW7 AC108032.1-201ENST00000416706 207 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 AL157831.1-201ENST00000426134 473 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 C8orf59P1-201ENST00000429930 303 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 Z74696.2-201ENST00000436514 498 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 HLA-N-201ENST00000437516 135 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 RPL23AP52-201ENST00000439311 478 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 PAXBP1P1-201ENST00000449315 447 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS45Q9NRW7 AC017015.1-201ENST00000477387 286 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 AC011825.1-201ENST00000484967 388 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 AC139783.2-201ENST00000504847 1145 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS45Q9NRW7 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS45Q9NRW7 FABP5P5-201ENST00000515537 406 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 MTND1P5-201ENST00000517906 940 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 OR5M7P-201ENST00000526140 972 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS45Q9NRW7 AL139174.1-201ENST00000531489 886 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS45Q9NRW7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
VPS45Q9NRW7 RN7SL600P-201ENST00000581811 299 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 SNRPGP15-201ENST00000600149 222 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 AL354984.3-201ENST00000604803 325 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 NDUFA8P1-201ENST00000605525 367 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 AC097468.3-201ENST00000607956 456 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 AC026368.1-201ENST00000614934 690 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS45Q9NRW7 AC027807.2-201ENST00000616099 408 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS45Q9NRW7 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
VPS45Q9NRW7 TEX21P-201ENST00000447107 1476 ntBASIC4.35□□□□□ -1.71
VPS45Q9NRW7 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS45Q9NRW7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
VPS45Q9NRW7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
VPS45Q9NRW7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS45Q9NRW7 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS45Q9NRW7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.34□□□□□ -1.71
VPS45Q9NRW7 AL161912.2-201ENST00000565707 3007 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
VPS45Q9NRW7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS45Q9NRW7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.34□□□□□ -1.71
VPS45Q9NRW7 Y_RNA.3-201ENST00000362331 103 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 RNU6-1215P-201ENST00000384441 102 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 MIR449B-201ENST00000384995 97 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 RN7SKP266-201ENST00000410232 287 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 RNU2-15P-201ENST00000410692 191 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS45Q9NRW7 RAC1P3-201ENST00000416129 580 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS45Q9NRW7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VPS45Q9NRW7 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS45Q9NRW7 AL513174.1-201ENST00000423182 629 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 PSMA6P3-201ENST00000428242 164 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS45Q9NRW7 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.34□□□□□ -1.71
VPS45Q9NRW7 MTND1P27-201ENST00000451117 902 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 TPT1P7-201ENST00000458300 517 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS45Q9NRW7 AP000926.1-201ENST00000479573 241 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 RN7SL691P-201ENST00000494487 301 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 BNIP3P41-201ENST00000503774 571 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 AC010460.1-201ENST00000507087 466 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS45Q9NRW7 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.34□□□□□ -1.71
VPS45Q9NRW7 DUXAP2-201ENST00000519198 589 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 AP004371.1-201ENST00000525240 214 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 AC018630.1-201ENST00000541376 925 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.34□□□□□ -1.71
VPS45Q9NRW7 SETP7-201ENST00000552169 453 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 MTND1P15-201ENST00000579262 949 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 AC091805.2-201ENST00000603848 235 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 HMGN2P28-201ENST00000606102 262 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 FAM27D1-201ENST00000612308 341 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 AC138932.5-201ENST00000617759 563 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 AC103858.2-201ENST00000621471 543 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 AC244100.1-202ENST00000621554 382 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS45Q9NRW7 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VPS45Q9NRW7 AC093591.3-201ENST00000634516 308 ntBASIC4.34□□□□□ -1.71
VPS45Q9NRW7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VPS45Q9NRW7 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms