Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 CYCSP19-201ENST00000411715 316 ntBASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 AL357078.2-201ENST00000416486 427 ntBASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 AL356320.2-201ENST00000417263 507 ntBASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 AL353678.1-201ENST00000422735 741 ntBASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 RPL7P2-201ENST00000427639 268 ntBASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 RSL24D1P8-201ENST00000434442 492 ntBASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 AC234064.1-201ENST00000436312 247 ntBASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 RPS29P7-201ENST00000439662 171 ntBASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 RN7SL610P-201ENST00000463845 291 ntBASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 AC023424.2-201ENST00000493479 777 ntBASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 AC104619.4-201ENST00000510773 249 ntBASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 ARL2BPP5-201ENST00000523141 481 ntBASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 PRELID2P1-201ENST00000552837 301 ntBASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 ACTR3BP3-201ENST00000565577 979 ntBASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 AC005046.1-201ENST00000608515 625 ntBASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 AC243312.2-201ENST00000623340 601 ntBASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 AC002064.3-201ENST00000623448 346 ntBASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 SNORA7.4-201ENST00000384249 137 ntBASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 RN7SKP159-201ENST00000410657 292 ntBASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 AL136133.1-201ENST00000413694 376 ntBASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 EZH2P1-201ENST00000431167 291 ntBASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 AL590762.3-201ENST00000436372 640 ntBASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 AC091862.1-201ENST00000438016 1100 ntBASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 VN1R104P-201ENST00000505115 1009 ntBASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 AC009901.1-201ENST00000506703 541 ntBASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 RNA5SP82-201ENST00000516707 92 ntBASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 OR5AK1P-201ENST00000524837 922 ntBASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 AC087373.1-201ENST00000524920 491 ntBASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 CASP1P1-201ENST00000526345 212 ntBASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 AC011611.5-201ENST00000552477 578 ntBASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 NCAPGP2-201ENST00000557911 754 ntBASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 SULT1C2P1-202ENST00000562418 459 ntBASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 MIR5186-201ENST00000577504 120 ntBASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 AC008739.2-201ENST00000597006 317 ntBASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 AC019159.1-201ENST00000605094 187 ntBASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 AC100793.4-201ENST00000613683 429 ntBASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 AC140725.3-201ENST00000616193 880 ntBASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 AC003001.2-201ENST00000616294 831 ntBASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 AC110079.1-202ENST00000635213 138 ntBASIC2.59□□□□□ -1.99
VCX3AQ9NNX9 AC093536.2-201ENST00000565257 1406 ntBASIC2.59□□□□□ -2
VCX3AQ9NNX9 AC080100.1-201ENST00000624239 5356 ntBASIC2.59□□□□□ -2
VCX3AQ9NNX9 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.58□□□□□ -2
VCX3AQ9NNX9 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.58□□□□□ -2
VCX3AQ9NNX9 MIR22-201ENST00000362190 85 ntBASIC2.58□□□□□ -2
VCX3AQ9NNX9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.58□□□□□ -2
VCX3AQ9NNX9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.58□□□□□ -2
VCX3AQ9NNX9 TAF9BP1-201ENST00000396646 746 ntBASIC2.58□□□□□ -2
VCX3AQ9NNX9 RPS4XP7-201ENST00000406274 780 ntBASIC2.58□□□□□ -2
VCX3AQ9NNX9 BX323014.1-201ENST00000412876 237 ntBASIC2.58□□□□□ -2
VCX3AQ9NNX9 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.58□□□□□ -2
VCX3AQ9NNX9 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.58□□□□□ -2
VCX3AQ9NNX9 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.58□□□□□ -2
VCX3AQ9NNX9 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.58□□□□□ -2
VCX3AQ9NNX9 AC016712.1-201ENST00000431088 378 ntBASIC2.58□□□□□ -2
VCX3AQ9NNX9 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.58□□□□□ -2
VCX3AQ9NNX9 AL513043.1-201ENST00000439124 535 ntBASIC2.58□□□□□ -2
VCX3AQ9NNX9 RAC1P7-201ENST00000445367 377 ntBASIC2.58□□□□□ -2
VCX3AQ9NNX9 Z95327.1-201ENST00000446082 482 ntBASIC2.58□□□□□ -2
VCX3AQ9NNX9 RPL21P23-201ENST00000446654 460 ntBASIC2.58□□□□□ -2
VCX3AQ9NNX9 GXYLT1P1-201ENST00000446657 490 ntBASIC2.58□□□□□ -2
VCX3AQ9NNX9 RPL7P55-201ENST00000450522 746 ntBASIC2.58□□□□□ -2
VCX3AQ9NNX9 RPL26P28-201ENST00000451325 435 ntBASIC2.58□□□□□ -2
VCX3AQ9NNX9 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.58□□□□□ -2
VCX3AQ9NNX9 Z82190.1-201ENST00000454534 490 ntBASIC2.58□□□□□ -2
VCX3AQ9NNX9 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.58□□□□□ -2
VCX3AQ9NNX9 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.58□□□□□ -2
VCX3AQ9NNX9 OR2A20P-203ENST00000498397 1268 ntBASIC2.58□□□□□ -2
VCX3AQ9NNX9 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms