Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.79□□□□□ -1.64
TRIM39Q9HCM9 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM39Q9HCM9 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.79□□□□□ -1.64
TRIM39Q9HCM9 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM39Q9HCM9 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM39Q9HCM9 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM39Q9HCM9 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM39Q9HCM9 AC015917.1-201ENST00000579654 510 ntBASIC4.79□□□□□ -1.64
TRIM39Q9HCM9 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
TRIM39Q9HCM9 AC022726.1-201ENST00000587475 207 ntBASIC4.79□□□□□ -1.64
TRIM39Q9HCM9 AL391358.1-201ENST00000605342 190 ntBASIC4.79□□□□□ -1.64
TRIM39Q9HCM9 AC006065.5-201ENST00000623427 349 ntBASIC4.79□□□□□ -1.64
TRIM39Q9HCM9 AL136313.1-201ENST00000624804 202 ntBASIC4.79□□□□□ -1.64
TRIM39Q9HCM9 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM39Q9HCM9 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TRIM39Q9HCM9 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM39Q9HCM9 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM39Q9HCM9 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TRIM39Q9HCM9 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 RNA5SP191-201ENST00000362585 102 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 RNU6-451P-201ENST00000362921 107 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 RNU6-1155P-201ENST00000363554 107 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 Y_RNA.367-201ENST00000365544 101 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 MIR454-201ENST00000390180 115 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 RNU6-1009P-201ENST00000390996 107 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 UBE2FP1-201ENST00000416536 447 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 MTCO3P12-201ENST00000416718 547 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 AL360081.1-201ENST00000428299 555 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 NRBF2P3-201ENST00000432731 865 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 AL451139.1-201ENST00000434718 346 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 RPS15AP9-201ENST00000439856 381 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 MTND4P25-201ENST00000441039 533 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 SNRPEP8-201ENST00000442866 260 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 AC006512.1-201ENST00000468816 291 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 AP000852.1-201ENST00000472460 573 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 AC126389.1-201ENST00000477436 290 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 RPS15AP36-201ENST00000492022 382 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 RNU6-709P-201ENST00000517257 104 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 CENPUP1-201ENST00000526649 1202 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 BNIP3P1-201ENST00000547295 580 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 UBE2V2P2-201ENST00000587677 504 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 AC087283.1-201ENST00000604029 1074 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 FAM27B-201ENST00000610601 213 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 Y_RNA.804-201ENST00000615262 101 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 AC104260.1-201ENST00000616660 539 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 AC104985.2-201ENST00000620598 500 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 AC009643.2-201ENST00000603543 1448 ntBASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM39Q9HCM9 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 AC116667.1-201ENST00000604855 2072 ntBASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 RNU6-1284P-201ENST00000363701 100 ntBASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 Y_RNA.255-201ENST00000364581 97 ntBASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 RNU6-996P-201ENST00000365438 107 ntBASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 U3.30-201ENST00000391308 210 ntBASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 MIR937-201ENST00000401271 86 ntBASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 AL591416.1-201ENST00000404015 867 ntBASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 OR9R1P-201ENST00000412200 877 ntBASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 RPL21P24-201ENST00000413752 448 ntBASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 RPS7P15-201ENST00000415804 584 ntBASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 AC099677.1-201ENST00000420575 175 ntBASIC4.77□□□□□ -1.65
TRIM39Q9HCM9 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms