Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 BX276092.4-201ENST00000452056 248 ntBASIC3.43□□□□□ -1.86
RNF41Q9H4P4 HMGN3P1-201ENST00000453847 193 ntBASIC3.43□□□□□ -1.86
RNF41Q9H4P4 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 AC080014.1-201ENST00000496877 1201 ntBASIC3.43□□□□□ -1.86
RNF41Q9H4P4 AC084024.2-201ENST00000503480 791 ntBASIC3.43□□□□□ -1.86
RNF41Q9H4P4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 TMEM248P1-201ENST00000510579 951 ntBASIC3.43□□□□□ -1.86
RNF41Q9H4P4 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 MIR3912-201ENST00000577566 105 ntBASIC3.43□□□□□ -1.86
RNF41Q9H4P4 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 VN1R83P-201ENST00000595685 445 ntBASIC3.43□□□□□ -1.86
RNF41Q9H4P4 AC011816.2-201ENST00000607089 556 ntBASIC3.43□□□□□ -1.86
RNF41Q9H4P4 AC106052.1-201ENST00000608029 497 ntBASIC3.43□□□□□ -1.86
RNF41Q9H4P4 AC107294.3-201ENST00000609211 526 ntBASIC3.43□□□□□ -1.86
RNF41Q9H4P4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.43□□□□□ -1.86
RNF41Q9H4P4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 OR1S1-201ENST00000624470 978 ntBASIC3.43□□□□□ -1.86
RNF41Q9H4P4 LINC02211-204ENST00000642024 1070 ntBASIC3.43□□□□□ -1.86
RNF41Q9H4P4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RNF41Q9H4P4 ZNF807-201ENST00000328088 1707 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 HMGB1P5-201ENST00000255320 642 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RNF41Q9H4P4 RNU6-1226P-201ENST00000384317 107 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 SNORD116-12-201ENST00000384468 92 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 AL136310.1-201ENST00000404926 654 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 AL133264.1-201ENST00000407157 562 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 AL136133.1-201ENST00000413694 376 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 AC007390.1-201ENST00000415722 356 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 Z75741.2-201ENST00000417272 1167 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.42□□□□□ -1.86
RNF41Q9H4P4 NANOGP5-201ENST00000424456 877 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 MTCO1P3-201ENST00000429327 192 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.42□□□□□ -1.86
RNF41Q9H4P4 RPS20P5-201ENST00000434808 360 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 AC093155.1-201ENST00000440164 826 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.42□□□□□ -1.86
RNF41Q9H4P4 AL589880.1-201ENST00000448271 287 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 RPS20P32-201ENST00000456044 356 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 DUXAP8-207ENST00000456786 622 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
RNF41Q9H4P4 RPS29P26-201ENST00000477483 171 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 VPS26AP1-201ENST00000483197 979 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.42□□□□□ -1.86
RNF41Q9H4P4 AC111000.2-201ENST00000507775 550 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 MTCYBP37-201ENST00000510642 1133 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.42□□□□□ -1.86
RNF41Q9H4P4 SCARNA13-201ENST00000516672 275 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.42□□□□□ -1.86
RNF41Q9H4P4 IGHV3-76-201ENST00000522465 295 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.42□□□□□ -1.86
RNF41Q9H4P4 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.42□□□□□ -1.86
RNF41Q9H4P4 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF41Q9H4P4 AC074051.3-201ENST00000570238 358 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.42□□□□□ -1.86
RNF41Q9H4P4 YWHAQP7-201ENST00000603536 658 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 DUXAP10-204ENST00000612052 616 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 AC023158.2-201ENST00000614876 543 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 AC121761.2-201ENST00000617300 689 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 AC138649.5-201ENST00000637456 137 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RNF41Q9H4P4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RNF41Q9H4P4 ZNF33CP-201ENST00000432492 2030 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RNF41Q9H4P4 AC093831.2-201ENST00000624393 3427 ntBASIC3.42□□□□□ -1.86
RNF41Q9H4P4 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RNF41Q9H4P4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.41□□□□□ -1.86
RNF41Q9H4P4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.41□□□□□ -1.86
RNF41Q9H4P4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RNF41Q9H4P4 AC138915.3-201ENST00000562908 1389 ntBASIC3.41□□□□□ -1.86
RNF41Q9H4P4 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RNF41Q9H4P4 SNORA72.3-201ENST00000365074 132 ntBASIC3.41□□□□□ -1.86
RNF41Q9H4P4 SUGT1P1-201ENST00000379514 476 ntBASIC3.41□□□□□ -1.86
RNF41Q9H4P4 MIR649-201ENST00000384843 97 ntBASIC3.41□□□□□ -1.86
RNF41Q9H4P4 AL121978.1-201ENST00000402778 359 ntBASIC3.41□□□□□ -1.86
RNF41Q9H4P4 RPL31P2-201ENST00000413849 377 ntBASIC3.41□□□□□ -1.86
RNF41Q9H4P4 MTATP6P20-201ENST00000414147 562 ntBASIC3.41□□□□□ -1.86
RNF41Q9H4P4 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.41□□□□□ -1.86
RNF41Q9H4P4 AL356320.2-201ENST00000417263 507 ntBASIC3.41□□□□□ -1.86
RNF41Q9H4P4 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.41□□□□□ -1.86
RNF41Q9H4P4 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.41□□□□□ -1.86
RNF41Q9H4P4 AC241584.1-201ENST00000438469 1241 ntBASIC3.41□□□□□ -1.86
RNF41Q9H4P4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.41□□□□□ -1.86
RNF41Q9H4P4 AC069528.1-202ENST00000482888 637 ntBASIC3.41□□□□□ -1.86
RNF41Q9H4P4 RPS3AP14-201ENST00000483907 780 ntBASIC3.41□□□□□ -1.86
RNF41Q9H4P4 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.41□□□□□ -1.86
RNF41Q9H4P4 AC093755.1-201ENST00000512950 1023 ntBASIC3.41□□□□□ -1.86
RNF41Q9H4P4 AC110760.3-202ENST00000515177 371 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms