Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.55□□□□□ -2
SLIRPQ9GZT3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.55□□□□□ -2
SLIRPQ9GZT3 ERHP1-201ENST00000523006 310 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 AC104417.1-201ENST00000523974 751 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 OR8I1P-201ENST00000529291 931 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 AP003066.2-201ENST00000529375 555 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.55□□□□□ -2
SLIRPQ9GZT3 GTF2IP22-201ENST00000554443 182 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.55□□□□□ -2
SLIRPQ9GZT3 MED28P6-201ENST00000558776 231 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.55□□□□□ -2
SLIRPQ9GZT3 AC023825.1-201ENST00000566704 1030 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 MIR3605-201ENST00000583214 100 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.55□□□□□ -2
SLIRPQ9GZT3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.55□□□□□ -2
SLIRPQ9GZT3 AL583856.2-201ENST00000606298 543 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 AP001521.1-201ENST00000609150 300 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 AC009570.1-201ENST00000609599 745 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.55□□□□□ -2
SLIRPQ9GZT3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.55□□□□□ -2
SLIRPQ9GZT3 AC004696.1-201ENST00000614345 607 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 AC018926.1-201ENST00000616335 435 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.55□□□□□ -2
SLIRPQ9GZT3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
SLIRPQ9GZT3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SLIRPQ9GZT3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
SLIRPQ9GZT3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
SLIRPQ9GZT3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.54□□□□□ -2
SLIRPQ9GZT3 AL513185.3-201ENST00000433335 1300 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 RNU6-1155P-201ENST00000363554 107 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 RNU6-707P-201ENST00000364647 95 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 DEFA7P-201ENST00000382676 285 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 SNORA7.4-201ENST00000384249 137 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 RNU6-878P-201ENST00000384578 110 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 MIR506-201ENST00000384998 124 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SLIRPQ9GZT3 RPL7P27-201ENST00000403775 720 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 RN7SKP159-201ENST00000410657 292 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 CYCSP19-201ENST00000411715 316 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 RPS7P9-201ENST00000414704 586 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.54□□□□□ -2
SLIRPQ9GZT3 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.54□□□□□ -2
SLIRPQ9GZT3 USP9YP36-201ENST00000424581 829 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.54□□□□□ -2
SLIRPQ9GZT3 AC013262.1-201ENST00000426710 252 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 MTATP6P4-201ENST00000427725 675 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 AC073063.1-201ENST00000434352 607 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 RPL23AP74-201ENST00000437246 471 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 AC092641.1-201ENST00000440229 772 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.54□□□□□ -2
SLIRPQ9GZT3 AL359073.1-201ENST00000448036 403 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 USP9YP34-201ENST00000453983 808 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.54□□□□□ -2
SLIRPQ9GZT3 AC003982.1-202ENST00000469928 248 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 NDUFA5P9-201ENST00000472609 340 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 AC015908.1-201ENST00000478739 476 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.54□□□□□ -2
SLIRPQ9GZT3 PRELID3BP6-201ENST00000503839 571 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.54□□□□□ -2
SLIRPQ9GZT3 NAMPTP2-201ENST00000505629 1115 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.54□□□□□ -2
SLIRPQ9GZT3 AC010625.1-201ENST00000511296 403 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 RNU6-711P-201ENST00000517255 106 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.54□□□□□ -2
SLIRPQ9GZT3 MTCO3P15-201ENST00000526563 574 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 AC068339.2-201ENST00000534395 618 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC2.54□□□□□ -2
SLIRPQ9GZT3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.54□□□□□ -2
SLIRPQ9GZT3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC2.54□□□□□ -2
SLIRPQ9GZT3 AL133393.1-201ENST00000603277 287 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 AC009220.3-201ENST00000604318 586 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 RPL21P136-201ENST00000605378 396 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 AC099785.1-201ENST00000605697 437 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 AC106028.5-201ENST00000610332 395 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.54□□□□□ -2
SLIRPQ9GZT3 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.54□□□□□ -2
SLIRPQ9GZT3 AC010975.3-201ENST00000618727 978 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 AL356585.4-201ENST00000623078 1229 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 AC109454.4-201ENST00000623411 649 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 MIR622-201ENST00000638396 96 ntBASIC2.54□□□□□ -2
SLIRPQ9GZT3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.54□□□□□ -2
SLIRPQ9GZT3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.53□□□□□ -2
SLIRPQ9GZT3 AC009487.2-201ENST00000420969 6821 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
SLIRPQ9GZT3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SLIRPQ9GZT3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
SLIRPQ9GZT3 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SLIRPQ9GZT3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.53□□□□□ -2
SLIRPQ9GZT3 MIR6073-201ENST00000352083 89 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.53□□□□□ -2
SLIRPQ9GZT3 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.53□□□□□ -2
SLIRPQ9GZT3 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.53□□□□□ -2
SLIRPQ9GZT3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC2.53□□□□□ -2
SLIRPQ9GZT3 AL603865.2-201ENST00000401679 213 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 HMGN2P35-201ENST00000412164 270 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 BTF3P8-201ENST00000414577 526 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.53□□□□□ -2
SLIRPQ9GZT3 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.53□□□□□ -2
SLIRPQ9GZT3 HSPE1P1-201ENST00000421494 318 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 PSMA6P3-201ENST00000428242 164 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms