Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 MTCO3P45-201ENST00000443036 613 ntBASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 AC090804.1-201ENST00000448870 490 ntBASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 AC239809.1-201ENST00000450470 217 ntBASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 PCNPP5-201ENST00000452246 481 ntBASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 PPIAP27-201ENST00000453800 265 ntBASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 AC068228.1-201ENST00000461723 211 ntBASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 RPS3AP41-201ENST00000462701 778 ntBASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 AC023194.2-201ENST00000465398 406 ntBASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 AP001086.1-201ENST00000494882 321 ntBASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 RPS24P16-201ENST00000497294 392 ntBASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 AC110743.1-201ENST00000584870 478 ntBASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 AL118522.2-201ENST00000616045 615 ntBASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 AC243312.2-201ENST00000623340 601 ntBASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 AC133552.1-201ENST00000569988 4007 ntBASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PHACTR1Q9C0D0 AC104118.1-201ENST00000607625 1589 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 IQCB2P-201ENST00000401788 1633 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 COX6B1P3-201ENST00000312310 260 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 Y_RNA.380-201ENST00000365663 111 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 RHOT1P2-201ENST00000366423 333 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 MIR548I3-201ENST00000408378 149 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 MIR548I1-201ENST00000408810 149 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 RNU4-65P-201ENST00000410473 140 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 RNU2-23P-201ENST00000410545 195 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 RPS15AP40-201ENST00000419621 391 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 RPS12P5-201ENST00000423449 371 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 AL389925.1-201ENST00000432257 728 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 HMGB3P24-201ENST00000433260 622 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 MRPS18BP2-201ENST00000434310 759 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 ATP5LP2-201ENST00000440646 311 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 FABP5P13-201ENST00000452144 328 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 RPS24P6-201ENST00000452670 400 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 RPL32P33-201ENST00000487023 394 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 AC006499.3-201ENST00000506077 748 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 PGAM1P13-201ENST00000507497 754 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 MTCO3P44-201ENST00000510977 541 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 CYCSP27-201ENST00000527643 293 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 TOMM20P1-201ENST00000534518 427 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 AC026371.1-201ENST00000551867 419 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 RN7SL290P-201ENST00000578661 300 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 AC005899.2-201ENST00000584353 90 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 AC011494.1-201ENST00000596454 237 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 MIR6071-201ENST00000616741 78 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 AC067931.1-201ENST00000624190 671 ntBASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHACTR1Q9C0D0 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms