Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 RNU6-50P-201ENST00000362356 103 ntBASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 Y_RNA.279-201ENST00000364763 95 ntBASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 AL645733.1-201ENST00000402250 217 ntBASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 AL162578.1-201ENST00000406202 378 ntBASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 FTH1P6-201ENST00000430768 320 ntBASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 RNU6-513P-201ENST00000516104 104 ntBASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 SCARNA20.4-201ENST00000516969 131 ntBASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 AC092490.3-201ENST00000545370 572 ntBASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 MIR4700-201ENST00000578311 74 ntBASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 AC008521.1-201ENST00000587471 187 ntBASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 AP000769.2-201ENST00000602344 396 ntBASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 AC006023.2-201ENST00000609916 167 ntBASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 SMG1P4-204ENST00000523028 4131 ntBASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
TRAIPQ9BWF2 MAPK10-328ENST00000641553 4009 ntBASIC5.77□□□□□ -1.48
TRAIPQ9BWF2 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 U3.3-201ENST00000362986 216 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 RN7SKP44-201ENST00000363602 316 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 SNORD56.6-201ENST00000384569 71 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 RNU6-550P-201ENST00000391057 101 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 AL121834.1-202ENST00000404494 277 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 AC080125.1-201ENST00000414888 684 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 AL591212.2-201ENST00000433923 257 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 VDAC1P3-201ENST00000434069 851 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 AL671855.1-201ENST00000446875 1203 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 AC104634.1-201ENST00000452720 462 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 AC007547.1-201ENST00000462177 490 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 RPL21P104-201ENST00000464143 478 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 AC041039.1-201ENST00000485656 536 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 AC083982.1-201ENST00000485679 344 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 AC117522.3-201ENST00000507974 584 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 RBBP4P6-201ENST00000508098 202 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 RNU6-507P-201ENST00000516045 100 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 RNU2-58P-201ENST00000516403 183 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 RNU6-143P-201ENST00000516942 93 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 AL137161.1-201ENST00000532231 390 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 AC243972.3-201ENST00000539655 198 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 AL049539.1-201ENST00000611964 459 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 AL390240.1-201ENST00000612950 384 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 AC090510.2-201ENST00000617465 629 ntBASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRAIPQ9BWF2 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 AL445487.1-201ENST00000415694 1580 ntBASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 SNORA31-201ENST00000362607 130 ntBASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 RNU6-797P-201ENST00000363101 109 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms