Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 CDH12P4-201ENST00000517835 295 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 CDH12P3-201ENST00000517935 295 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 CDH12P1-201ENST00000518435 295 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 AC007834.2-201ENST00000536310 343 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 OSBPL9P5-201ENST00000542581 171 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 ELOCP32-201ENST00000548625 324 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 MIR3690-201ENST00000580266 75 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 BNIP3P24-201ENST00000593398 557 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 AC020914.6-201ENST00000594327 272 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 AC113194.1-201ENST00000606037 500 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 AC078883.4-201ENST00000623218 367 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 AC103706.2-201ENST00000638080 240 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 AC010733.2-201ENST00000589496 5702 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 AC090337.1-201ENST00000579651 2074 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 FAM35CP-201ENST00000554755 2470 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 SNRPEP3-201ENST00000338402 276 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 RNU6-1226P-201ENST00000384317 107 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 SNORD116-8-201ENST00000384365 95 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 ATP5F1P3-201ENST00000397213 657 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 PPIAP31-201ENST00000405422 495 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 MIR1284-201ENST00000408337 120 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 NIPA2P1-201ENST00000426223 976 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 MTND5P2-201ENST00000442927 1142 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 UQCRHP3-201ENST00000451503 251 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 HMGN2P16-201ENST00000456802 261 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 ARPC3P2-201ENST00000457786 533 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 SNORD105B-201ENST00000458770 79 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 NCOR1P1-202ENST00000486162 291 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 LINC00888-204ENST00000487386 421 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 AC118465.1-201ENST00000513820 1271 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 AL512347.1-201ENST00000566420 503 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 ISCA1P3-201ENST00000577104 373 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 AC106791.2-201ENST00000604680 391 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 AL133507.1-201ENST00000605269 557 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 AC006270.3-201ENST00000605967 1036 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 AC097065.2-201ENST00000608159 533 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 AL136981.2-201ENST00000617319 734 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 AL603755.1-201ENST00000619504 163 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 AC022079.1-201ENST00000621546 602 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 RNA5SP196-201ENST00000625967 102 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 AL136164.4-201ENST00000625013 2135 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 AL356274.2-201ENST00000624379 3752 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 AC110774.1-201ENST00000623567 2018 ntBASIC3.26□□□□□ -1.89
CCDC28BQ9BUN5 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 CR383658.2-201ENST00000547576 1525 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AL391994.1-201ENST00000254724 282 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 OR5H2-201ENST00000355273 945 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 RNU6-657P-201ENST00000383904 107 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 MIR585-201ENST00000384887 94 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 RPL5P18-201ENST00000406671 891 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 EI24P1-201ENST00000416584 867 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms