Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 MTND4P21-201ENST00000453886 1357 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AL035425.3-201ENST00000564206 4996 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.13□□□□□ -2.07
UPK3BQ9BT76 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
UPK3BQ9BT76 SNORA14A-201ENST00000364773 135 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
UPK3BQ9BT76 MIR16-1-201ENST00000385271 89 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 SNORD65C-201ENST00000390962 71 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 RPL17P50-201ENST00000396131 546 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 TMSB4XP8-201ENST00000402089 135 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 NDUFB4P4-201ENST00000404822 243 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 FAT1P1-201ENST00000406588 507 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 HMGN2P35-201ENST00000412164 270 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AL445183.3-201ENST00000414168 502 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 TMSB4XP6-201ENST00000415187 135 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 SSXP9-201ENST00000417503 292 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 ATG3P1-201ENST00000419507 911 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 TMSB4XP1-201ENST00000424567 135 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 USP9YP36-201ENST00000424581 829 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AC079780.1-201ENST00000428259 207 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.13□□□□□ -2.07
UPK3BQ9BT76 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.13□□□□□ -2.07
UPK3BQ9BT76 UBE2V1P6-201ENST00000430840 422 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AC108734.1-201ENST00000439549 399 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 HSFY3P-201ENST00000444242 1191 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AL671855.1-201ENST00000446875 1203 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AC016696.1-201ENST00000446949 318 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.13□□□□□ -2.07
UPK3BQ9BT76 MTND2P19-201ENST00000449129 1012 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 UQCRHP3-201ENST00000451503 251 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 NDUFA5P7-201ENST00000452914 242 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC2.13□□□□□ -2.07
UPK3BQ9BT76 PABPC1P3-201ENST00000469174 459 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.13□□□□□ -2.07
UPK3BQ9BT76 ST13P14-201ENST00000474095 734 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.13□□□□□ -2.07
UPK3BQ9BT76 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.13□□□□□ -2.07
UPK3BQ9BT76 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.13□□□□□ -2.07
UPK3BQ9BT76 RNA5SP341-201ENST00000516261 117 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.13□□□□□ -2.07
UPK3BQ9BT76 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AC107016.2-201ENST00000547968 190 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AC011611.5-201ENST00000552477 578 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.13□□□□□ -2.07
UPK3BQ9BT76 NIFKP8-201ENST00000560500 874 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 LINC00557-201ENST00000563184 1279 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 FAM60BP-201ENST00000578364 658 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.13□□□□□ -2.07
UPK3BQ9BT76 ZNF92P2-201ENST00000600543 1059 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AC009570.1-201ENST00000609599 745 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AL591516.1-201ENST00000611326 274 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 VN1R9P-201ENST00000614184 867 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 MIR6076-201ENST00000617521 113 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AC091046.2-201ENST00000620775 665 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AL049780.3-201ENST00000624612 1583 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 Z82195.2-201ENST00000612348 18351 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 ZNF833P-201ENST00000424938 1494 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
UPK3BQ9BT76 AC006378.2-201ENST00000623178 2476 ntBASIC2.12□□□□□ -2.07
UPK3BQ9BT76 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
UPK3BQ9BT76 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
UPK3BQ9BT76 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.12□□□□□ -2.07
UPK3BQ9BT76 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
UPK3BQ9BT76 RNU6-115P-201ENST00000364310 107 ntBASIC2.12□□□□□ -2.07
UPK3BQ9BT76 SNORA71.1-201ENST00000364523 117 ntBASIC2.12□□□□□ -2.07
UPK3BQ9BT76 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.12□□□□□ -2.07
UPK3BQ9BT76 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
UPK3BQ9BT76 CD24P4-201ENST00000382840 243 ntBASIC2.12□□□□□ -2.07
UPK3BQ9BT76 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.12□□□□□ -2.07
UPK3BQ9BT76 CYCSP45-201ENST00000402289 315 ntBASIC2.12□□□□□ -2.07
UPK3BQ9BT76 RN7SKP220-201ENST00000410611 288 ntBASIC2.12□□□□□ -2.07
UPK3BQ9BT76 RNA5SP38-201ENST00000410750 119 ntBASIC2.12□□□□□ -2.07
UPK3BQ9BT76 RNA5SP492-201ENST00000411330 114 ntBASIC2.12□□□□□ -2.07
UPK3BQ9BT76 AC245054.2-201ENST00000415639 319 ntBASIC2.12□□□□□ -2.07
UPK3BQ9BT76 AL606495.1-201ENST00000422100 813 ntBASIC2.12□□□□□ -2.07
UPK3BQ9BT76 AC246680.2-201ENST00000422106 389 ntBASIC2.12□□□□□ -2.07
UPK3BQ9BT76 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.12□□□□□ -2.07
UPK3BQ9BT76 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.12□□□□□ -2.07
UPK3BQ9BT76 AL645638.1-201ENST00000440519 361 ntBASIC2.12□□□□□ -2.07
UPK3BQ9BT76 MTCO3P43-201ENST00000440974 771 ntBASIC2.12□□□□□ -2.07
UPK3BQ9BT76 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.12□□□□□ -2.07
UPK3BQ9BT76 NANOGNBP1-201ENST00000448444 480 ntBASIC2.12□□□□□ -2.07
UPK3BQ9BT76 RPL7P55-201ENST00000450522 746 ntBASIC2.12□□□□□ -2.07
UPK3BQ9BT76 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.12□□□□□ -2.07
UPK3BQ9BT76 SETP6-201ENST00000479329 568 ntBASIC2.12□□□□□ -2.07
UPK3BQ9BT76 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
UPK3BQ9BT76 SETP12-201ENST00000514068 805 ntBASIC2.12□□□□□ -2.07
UPK3BQ9BT76 RNU6-1102P-201ENST00000516149 96 ntBASIC2.12□□□□□ -2.07
UPK3BQ9BT76 RN7SKP272-201ENST00000516988 232 ntBASIC2.12□□□□□ -2.07
UPK3BQ9BT76 SCARNA20.6-201ENST00000517251 106 ntBASIC2.12□□□□□ -2.07
UPK3BQ9BT76 AC026616.1-201ENST00000523157 525 ntBASIC2.12□□□□□ -2.07
UPK3BQ9BT76 AP000790.1-201ENST00000528891 737 ntBASIC2.12□□□□□ -2.07
UPK3BQ9BT76 AP000916.1-201ENST00000533869 835 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms