Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.27□□□□□ -1.73
VRK1Q99986 AC087385.3-201ENST00000620477 187 ntBASIC4.27□□□□□ -1.73
VRK1Q99986 FER-210ENST00000628534 558 ntTSL 5 BASIC4.27□□□□□ -1.73
VRK1Q99986 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.27□□□□□ -1.73
VRK1Q99986 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
VRK1Q99986 AC099654.2-201ENST00000433031 1980 ntBASIC4.27□□□□□ -1.73
VRK1Q99986 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
VRK1Q99986 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
VRK1Q99986 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VRK1Q99986 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VRK1Q99986 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VRK1Q99986 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
VRK1Q99986 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VRK1Q99986 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
VRK1Q99986 AC074029.4-201ENST00000624796 1859 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
VRK1Q99986 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
VRK1Q99986 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
VRK1Q99986 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VRK1Q99986 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VRK1Q99986 DHX9P1-201ENST00000436565 3076 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 ZNF680P1-201ENST00000436625 1469 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
VRK1Q99986 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.26□□□□□ -1.73
VRK1Q99986 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VRK1Q99986 RNU5E-8P-201ENST00000363502 116 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 MIR558-201ENST00000384920 94 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 RNU6-908P-201ENST00000410160 94 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 ZNF90P2-204ENST00000419323 1075 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.26□□□□□ -1.73
VRK1Q99986 MED13P1-201ENST00000428342 171 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.26□□□□□ -1.73
VRK1Q99986 NEK4P1-201ENST00000433383 879 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 RPS26P2-201ENST00000440331 348 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.26□□□□□ -1.73
VRK1Q99986 CALM1P1-201ENST00000442082 433 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 RPL7AP61-201ENST00000443410 636 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.26□□□□□ -1.73
VRK1Q99986 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.26□□□□□ -1.73
VRK1Q99986 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.26□□□□□ -1.73
VRK1Q99986 SNORD108-201ENST00000459332 71 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 RNU6-261P-201ENST00000459506 102 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 AC006967.1-201ENST00000467608 589 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.26□□□□□ -1.73
VRK1Q99986 AC069439.1-201ENST00000494739 167 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VRK1Q99986 AC021146.3-201ENST00000511911 260 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 RNU6-358P-201ENST00000516564 75 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 RNU6-64P-201ENST00000517119 105 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 AC100870.1-201ENST00000522035 505 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.26□□□□□ -1.73
VRK1Q99986 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VRK1Q99986 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.26□□□□□ -1.73
VRK1Q99986 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.26□□□□□ -1.73
VRK1Q99986 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.26□□□□□ -1.73
VRK1Q99986 AC126177.3-201ENST00000551839 688 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.26□□□□□ -1.73
VRK1Q99986 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.26□□□□□ -1.73
VRK1Q99986 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.26□□□□□ -1.73
VRK1Q99986 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.26□□□□□ -1.73
VRK1Q99986 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.26□□□□□ -1.73
VRK1Q99986 Z84480.1-201ENST00000605131 311 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 AP001521.2-201ENST00000608772 546 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 uc_338.18-201ENST00000615451 175 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.26□□□□□ -1.73
VRK1Q99986 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.26□□□□□ -1.73
VRK1Q99986 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.26□□□□□ -1.73
VRK1Q99986 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.26□□□□□ -1.73
VRK1Q99986 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
VRK1Q99986 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.26□□□□□ -1.73
VRK1Q99986 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.26□□□□□ -1.73
VRK1Q99986 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VRK1Q99986 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
VRK1Q99986 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.26□□□□□ -1.73
VRK1Q99986 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VRK1Q99986 MAPK10-303ENST00000641324 3959 ntBASIC4.26□□□□□ -1.73
VRK1Q99986 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.26□□□□□ -1.73
VRK1Q99986 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
VRK1Q99986 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VRK1Q99986 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
VRK1Q99986 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
VRK1Q99986 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
VRK1Q99986 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
VRK1Q99986 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
VRK1Q99986 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VRK1Q99986 AC108751.5-201ENST00000492880 1336 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.25□□□□□ -1.73
VRK1Q99986 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
VRK1Q99986 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VRK1Q99986 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
VRK1Q99986 DDX10P1-201ENST00000448545 1933 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.25□□□□□ -1.73
VRK1Q99986 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.25□□□□□ -1.73
VRK1Q99986 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
VRK1Q99986 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
VRK1Q99986 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
VRK1Q99986 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VRK1Q99986 RNA5SP443-201ENST00000363083 132 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms